Gene : Seita.8G034000 S. italica v2.2
Defline:  (1 of 2) PTHR11362:SF13 - PROTEIN TERMINAL FLOWER 1 Genomic Order:  340
Name:  ? Seita.8G034000 Secondary Identifier:  ? PAC:32717567
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G034000 0.5kb upstream 0.5kb upstream 1970 true scaffold_8: 2218605-2220574 Setaria italica
Seita.8G034000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2220075-2220574 Setaria italica
Seita.8G034000 0.5kb downstream 0.5kb downstream 1970 true scaffold_8: 2218105-2220074 Setaria italica
Seita.8G034000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2218105-2218604 Setaria italica
Seita.8G034000 1.0kb upstream 1.0kb upstream 2470 true scaffold_8: 2218605-2221074 Setaria italica
Seita.8G034000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2220075-2221074 Setaria italica
Seita.8G034000 1.0kb downstream 1.0kb downstream 2470 true scaffold_8: 2217605-2220074 Setaria italica
Seita.8G034000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2217605-2218604 Setaria italica
Seita.8G034000 2.0kb upstream 2.0kb upstream 3470 true scaffold_8: 2218605-2222074 Setaria italica
Seita.8G034000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2220075-2222074 Setaria italica
Seita.8G034000 2.0kb downstream 2.0kb downstream 3470 true scaffold_8: 2216605-2220074 Setaria italica
Seita.8G034000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2216605-2218604 Setaria italica
Seita.8G034000 5.0kb upstream 5.0kb upstream 6470 true scaffold_8: 2218605-2225074 Setaria italica
Seita.8G034000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2220075-2225074 Setaria italica
Seita.8G034000 5.0kb downstream 5.0kb downstream 6470 true scaffold_8: 2213605-2220074 Setaria italica
Seita.8G034000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2213605-2218604 Setaria italica
Seita.8G034000 10.0kb upstream 10.0kb upstream 11470 true scaffold_8: 2218605-2230074 Setaria italica
Seita.8G034000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2220075-2230074 Setaria italica
Seita.8G034000 10.0kb downstream 10.0kb downstream 11470 true scaffold_8: 2208605-2220074 Setaria italica
Seita.8G034000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2208605-2218604 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198471 5267 Panicoideae View MSA
124590595 5269 Grass View MSA
122043822 5273 Angiosperm View MSA
123429087 5275 Viridiplantae View MSA
121348505 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.064     Low  
cufflinks 0.047     Low  
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low Low
cufflinks 0.15        
cufflinks 0.96        
cufflinks 0.699        
cufflinks 0.274        
cufflinks 1.905       High
cufflinks 4.009       High
cufflinks 0.659        
cufflinks 1.07        
cufflinks 0.083     Low  
cufflinks 5.058       High
cufflinks 0.14        
cufflinks 2.011       High
cufflinks 0.044     Low  
cufflinks 0.032     Low Low
cufflinks 0.836        

0 Strain