Gene : Seita.8G035100 S. italica v2.2
Defline:  (1 of 11) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  351
Name:  ? Seita.8G035100 Secondary Identifier:  ? PAC:32715598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G035100 0.5kb upstream 0.5kb upstream 1995 true scaffold_8: 2271798-2273792 Setaria italica
Seita.8G035100 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2273293-2273792 Setaria italica
Seita.8G035100 0.5kb downstream 0.5kb downstream 1995 true scaffold_8: 2271298-2273292 Setaria italica
Seita.8G035100 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2271298-2271797 Setaria italica
Seita.8G035100 1.0kb upstream 1.0kb upstream 2495 true scaffold_8: 2271798-2274292 Setaria italica
Seita.8G035100 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2273293-2274292 Setaria italica
Seita.8G035100 1.0kb downstream 1.0kb downstream 2495 true scaffold_8: 2270798-2273292 Setaria italica
Seita.8G035100 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2270798-2271797 Setaria italica
Seita.8G035100 2.0kb upstream 2.0kb upstream 3495 true scaffold_8: 2271798-2275292 Setaria italica
Seita.8G035100 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2273293-2275292 Setaria italica
Seita.8G035100 2.0kb downstream 2.0kb downstream 3495 true scaffold_8: 2269798-2273292 Setaria italica
Seita.8G035100 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2269798-2271797 Setaria italica
Seita.8G035100 5.0kb upstream 5.0kb upstream 6495 true scaffold_8: 2271798-2278292 Setaria italica
Seita.8G035100 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2273293-2278292 Setaria italica
Seita.8G035100 5.0kb downstream 5.0kb downstream 6495 true scaffold_8: 2266798-2273292 Setaria italica
Seita.8G035100 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2266798-2271797 Setaria italica
Seita.8G035100 10.0kb upstream 10.0kb upstream 11495 true scaffold_8: 2271798-2283292 Setaria italica
Seita.8G035100 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2273293-2283292 Setaria italica
Seita.8G035100 10.0kb downstream 10.0kb downstream 11495 true scaffold_8: 2261798-2273292 Setaria italica
Seita.8G035100 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2261798-2271797 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122192119 5267 Panicoideae View MSA
124584437 5269 Grass View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.016     Low Low
cufflinks 0.148        
cufflinks 2.123       High
cufflinks 0.89        
cufflinks 1.127        
cufflinks 0.128     Low  
cufflinks 1.707       High
cufflinks 1.012        
cufflinks 0.251        
cufflinks 0.112     Low  
cufflinks 0.007     Low Low
cufflinks 0.017     Low Low
cufflinks 0.023     Low Low
cufflinks 5.351       High
cufflinks 0.028     Low  
cufflinks 2.128       High
cufflinks 0.05     Low  
cufflinks 0.049     Low  
cufflinks 4.052       High
cufflinks 0.029     Low  

0 Strain