Gene : Seita.8G136500 S. italica v2.2
Defline:  (1 of 1) PTHR11607//PTHR11607:SF35 - ALPHA-MANNOSIDASE Genomic Order:  1365
Name:  ? Seita.8G136500 Secondary Identifier:  ? PAC:32715867
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G136500 0.5kb upstream 0.5kb upstream 9681 true scaffold_8: 26386467-26396147 Setaria italica
Seita.8G136500 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 26386467-26386966 Setaria italica
Seita.8G136500 0.5kb downstream 0.5kb downstream 9681 true scaffold_8: 26386967-26396647 Setaria italica
Seita.8G136500 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 26396148-26396647 Setaria italica
Seita.8G136500 1.0kb upstream 1.0kb upstream 10181 true scaffold_8: 26385967-26396147 Setaria italica
Seita.8G136500 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 26385967-26386966 Setaria italica
Seita.8G136500 1.0kb downstream 1.0kb downstream 10181 true scaffold_8: 26386967-26397147 Setaria italica
Seita.8G136500 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 26396148-26397147 Setaria italica
Seita.8G136500 2.0kb upstream 2.0kb upstream 11181 true scaffold_8: 26384967-26396147 Setaria italica
Seita.8G136500 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 26384967-26386966 Setaria italica
Seita.8G136500 2.0kb downstream 2.0kb downstream 11181 true scaffold_8: 26386967-26398147 Setaria italica
Seita.8G136500 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 26396148-26398147 Setaria italica
Seita.8G136500 5.0kb upstream 5.0kb upstream 14181 true scaffold_8: 26381967-26396147 Setaria italica
Seita.8G136500 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 26381967-26386966 Setaria italica
Seita.8G136500 5.0kb downstream 5.0kb downstream 14181 true scaffold_8: 26386967-26401147 Setaria italica
Seita.8G136500 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 26396148-26401147 Setaria italica
Seita.8G136500 10.0kb upstream 10.0kb upstream 19181 true scaffold_8: 26376967-26396147 Setaria italica
Seita.8G136500 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 26376967-26386966 Setaria italica
Seita.8G136500 10.0kb downstream 10.0kb downstream 19181 true scaffold_8: 26386967-26406147 Setaria italica
Seita.8G136500 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 26396148-26406147 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182208 5267 Panicoideae View MSA
124579305 5269 Grass View MSA
122044684 5273 Angiosperm View MSA
121351343 5274 Embryophyte View MSA
123424648 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.501     High High
cufflinks 22.257     High  
cufflinks 20.082     High  
cufflinks 20.0     High  
cufflinks 14.749     High  
cufflinks 24.622     High  
cufflinks 32.363     High High
cufflinks 15.391     High  
cufflinks 20.279     High  
cufflinks 19.329     High  
cufflinks 37.077     High High
cufflinks 15.771     High  
cufflinks 32.055     High  
cufflinks 5.352       Low
cufflinks 20.389     High  
cufflinks 33.416     High High
cufflinks 23.38     High  
cufflinks 20.208     High  
cufflinks 9.773       Low
cufflinks 22.139     High  

0 Strain