Gene : Seita.8G139100 S. italica v2.2
Defline:  (1 of 1) PTHR17130//PTHR17130:SF25 - MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25 Genomic Order:  1391
Name:  ? Seita.8G139100 Secondary Identifier:  ? PAC:32716095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G139100 0.5kb upstream 0.5kb upstream 2602 true scaffold_8: 26991088-26993689 Setaria italica
Seita.8G139100 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 26993190-26993689 Setaria italica
Seita.8G139100 0.5kb downstream 0.5kb downstream 2602 true scaffold_8: 26990588-26993189 Setaria italica
Seita.8G139100 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 26990588-26991087 Setaria italica
Seita.8G139100 1.0kb upstream 1.0kb upstream 3102 true scaffold_8: 26991088-26994189 Setaria italica
Seita.8G139100 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 26993190-26994189 Setaria italica
Seita.8G139100 1.0kb downstream 1.0kb downstream 3102 true scaffold_8: 26990088-26993189 Setaria italica
Seita.8G139100 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 26990088-26991087 Setaria italica
Seita.8G139100 2.0kb upstream 2.0kb upstream 4102 true scaffold_8: 26991088-26995189 Setaria italica
Seita.8G139100 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 26993190-26995189 Setaria italica
Seita.8G139100 2.0kb downstream 2.0kb downstream 4102 true scaffold_8: 26989088-26993189 Setaria italica
Seita.8G139100 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 26989088-26991087 Setaria italica
Seita.8G139100 5.0kb upstream 5.0kb upstream 7102 true scaffold_8: 26991088-26998189 Setaria italica
Seita.8G139100 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 26993190-26998189 Setaria italica
Seita.8G139100 5.0kb downstream 5.0kb downstream 7102 true scaffold_8: 26986088-26993189 Setaria italica
Seita.8G139100 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 26986088-26991087 Setaria italica
Seita.8G139100 10.0kb upstream 10.0kb upstream 12102 true scaffold_8: 26991088-27003189 Setaria italica
Seita.8G139100 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 26993190-27003189 Setaria italica
Seita.8G139100 10.0kb downstream 10.0kb downstream 12102 true scaffold_8: 26981088-26993189 Setaria italica
Seita.8G139100 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 26981088-26991087 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175503 5267 Panicoideae View MSA
124570995 5269 Grass View MSA
122045376 5273 Angiosperm View MSA
121346766 5274 Embryophyte View MSA
123425626 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.365        
cufflinks 5.144        
cufflinks 7.17        
cufflinks 13.573     High  
cufflinks 35.238     High High
cufflinks 4.086        
cufflinks 22.653     High  
cufflinks 54.543     High High
cufflinks 41.004     High High
cufflinks 4.37        
cufflinks 2.576        
cufflinks 0.213       Low
cufflinks 1.272        
cufflinks 7.063        
cufflinks 0.136       Low
cufflinks 24.843     High  
cufflinks 0.475       Low
cufflinks 3.351        
cufflinks 27.047     High  
cufflinks 0.52       Low

0 Strain