Gene : Seita.8G145000 S. italica v2.2
Defline:  (1 of 1) PTHR12205 - CENTROMERE/KINETOCHORE PROTEIN ZW10 Genomic Order:  1450
Name:  ? Seita.8G145000 Secondary Identifier:  ? PAC:32715077
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G145000 0.5kb upstream 0.5kb upstream 10100 true scaffold_8: 28042693-28052792 Setaria italica
Seita.8G145000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 28052293-28052792 Setaria italica
Seita.8G145000 0.5kb downstream 0.5kb downstream 10100 true scaffold_8: 28042193-28052292 Setaria italica
Seita.8G145000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 28042193-28042692 Setaria italica
Seita.8G145000 1.0kb upstream 1.0kb upstream 10600 true scaffold_8: 28042693-28053292 Setaria italica
Seita.8G145000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 28052293-28053292 Setaria italica
Seita.8G145000 1.0kb downstream 1.0kb downstream 10600 true scaffold_8: 28041693-28052292 Setaria italica
Seita.8G145000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 28041693-28042692 Setaria italica
Seita.8G145000 2.0kb upstream 2.0kb upstream 11600 true scaffold_8: 28042693-28054292 Setaria italica
Seita.8G145000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 28052293-28054292 Setaria italica
Seita.8G145000 2.0kb downstream 2.0kb downstream 11600 true scaffold_8: 28040693-28052292 Setaria italica
Seita.8G145000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 28040693-28042692 Setaria italica
Seita.8G145000 5.0kb upstream 5.0kb upstream 14600 true scaffold_8: 28042693-28057292 Setaria italica
Seita.8G145000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 28052293-28057292 Setaria italica
Seita.8G145000 5.0kb downstream 5.0kb downstream 14600 true scaffold_8: 28037693-28052292 Setaria italica
Seita.8G145000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 28037693-28042692 Setaria italica
Seita.8G145000 10.0kb upstream 10.0kb upstream 19600 true scaffold_8: 28042693-28062292 Setaria italica
Seita.8G145000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 28052293-28062292 Setaria italica
Seita.8G145000 10.0kb downstream 10.0kb downstream 19600 true scaffold_8: 28032693-28052292 Setaria italica
Seita.8G145000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 28032693-28042692 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180405 5267 Panicoideae View MSA
124582030 5269 Grass View MSA
122044913 5273 Angiosperm View MSA
121344793 5274 Embryophyte View MSA
123424483 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.565        
cufflinks 3.568        
cufflinks 2.895        
cufflinks 2.551        
cufflinks 1.733       Low
cufflinks 3.096        
cufflinks 2.69        
cufflinks 2.652        
cufflinks 1.846       Low
cufflinks 3.586        
cufflinks 3.158        
cufflinks 3.114        
cufflinks 2.486        
cufflinks 3.06        
cufflinks 3.683       High
cufflinks 2.876        
cufflinks 3.189        
cufflinks 3.717       High
cufflinks 2.699        
cufflinks 3.45        

0 Strain