Gene : Seita.8G148600 S. italica v2.2
Genomic Order:  1486 Name:  ? Seita.8G148600
Secondary Identifier:  ? PAC:32715532
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G148600 0.5kb upstream 0.5kb upstream 3100 true scaffold_8: 28519332-28522431 Setaria italica
Seita.8G148600 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 28521932-28522431 Setaria italica
Seita.8G148600 0.5kb downstream 0.5kb downstream 3100 true scaffold_8: 28518832-28521931 Setaria italica
Seita.8G148600 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 28518832-28519331 Setaria italica
Seita.8G148600 1.0kb upstream 1.0kb upstream 3600 true scaffold_8: 28519332-28522931 Setaria italica
Seita.8G148600 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 28521932-28522931 Setaria italica
Seita.8G148600 1.0kb downstream 1.0kb downstream 3600 true scaffold_8: 28518332-28521931 Setaria italica
Seita.8G148600 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 28518332-28519331 Setaria italica
Seita.8G148600 2.0kb upstream 2.0kb upstream 4600 true scaffold_8: 28519332-28523931 Setaria italica
Seita.8G148600 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 28521932-28523931 Setaria italica
Seita.8G148600 2.0kb downstream 2.0kb downstream 4600 true scaffold_8: 28517332-28521931 Setaria italica
Seita.8G148600 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 28517332-28519331 Setaria italica
Seita.8G148600 5.0kb upstream 5.0kb upstream 7600 true scaffold_8: 28519332-28526931 Setaria italica
Seita.8G148600 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 28521932-28526931 Setaria italica
Seita.8G148600 5.0kb downstream 5.0kb downstream 7600 true scaffold_8: 28514332-28521931 Setaria italica
Seita.8G148600 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 28514332-28519331 Setaria italica
Seita.8G148600 10.0kb upstream 10.0kb upstream 12600 true scaffold_8: 28519332-28531931 Setaria italica
Seita.8G148600 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 28521932-28531931 Setaria italica
Seita.8G148600 10.0kb downstream 10.0kb downstream 12600 true scaffold_8: 28509332-28521931 Setaria italica
Seita.8G148600 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 28509332-28519331 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176252 5267 Panicoideae View MSA
124576200 5269 Grass View MSA
122041953 5273 Angiosperm View MSA
121346344 5274 Embryophyte View MSA
123425331 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.591        
cufflinks 0.87       Low
cufflinks 27.662     High High
cufflinks 22.151     High High
cufflinks 8.191        
cufflinks 0.772       Low
cufflinks 8.218        
cufflinks 14.171     High  
cufflinks 1.741        
cufflinks 3.375        
cufflinks 1.774        
cufflinks 4.736        
cufflinks 2.725        
cufflinks 51.961     High High
cufflinks 1.623        
cufflinks 12.924     High  
cufflinks 2.471        
cufflinks 7.726        
cufflinks 54.811     High High
cufflinks 1.549        

0 Strain