Gene : Seita.8G148000 S. italica v2.2
Defline:  (1 of 1) PTHR10566:SF59 - SERINE/THREONINE-PROTEIN KINASE ABKD-RELATED Genomic Order:  1480
Name:  ? Seita.8G148000 Secondary Identifier:  ? PAC:32714827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G148000 0.5kb upstream 0.5kb upstream 9834 true scaffold_8: 28465915-28475748 Setaria italica
Seita.8G148000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 28465915-28466414 Setaria italica
Seita.8G148000 0.5kb downstream 0.5kb downstream 9834 true scaffold_8: 28466415-28476248 Setaria italica
Seita.8G148000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 28475749-28476248 Setaria italica
Seita.8G148000 1.0kb upstream 1.0kb upstream 10334 true scaffold_8: 28465415-28475748 Setaria italica
Seita.8G148000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 28465415-28466414 Setaria italica
Seita.8G148000 1.0kb downstream 1.0kb downstream 10334 true scaffold_8: 28466415-28476748 Setaria italica
Seita.8G148000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 28475749-28476748 Setaria italica
Seita.8G148000 2.0kb upstream 2.0kb upstream 11334 true scaffold_8: 28464415-28475748 Setaria italica
Seita.8G148000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 28464415-28466414 Setaria italica
Seita.8G148000 2.0kb downstream 2.0kb downstream 11334 true scaffold_8: 28466415-28477748 Setaria italica
Seita.8G148000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 28475749-28477748 Setaria italica
Seita.8G148000 5.0kb upstream 5.0kb upstream 14334 true scaffold_8: 28461415-28475748 Setaria italica
Seita.8G148000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 28461415-28466414 Setaria italica
Seita.8G148000 5.0kb downstream 5.0kb downstream 14334 true scaffold_8: 28466415-28480748 Setaria italica
Seita.8G148000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 28475749-28480748 Setaria italica
Seita.8G148000 10.0kb upstream 10.0kb upstream 19334 true scaffold_8: 28456415-28475748 Setaria italica
Seita.8G148000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 28456415-28466414 Setaria italica
Seita.8G148000 10.0kb downstream 10.0kb downstream 19334 true scaffold_8: 28466415-28485748 Setaria italica
Seita.8G148000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 28475749-28485748 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186561 5267 Panicoideae View MSA
124573028 5269 Grass View MSA
122044074 5273 Angiosperm View MSA
121346722 5274 Embryophyte View MSA
123427066 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.747       High
cufflinks 0.816       High
cufflinks 0.532        
cufflinks 0.38       Low
cufflinks 0.389       Low
cufflinks 0.829       High
cufflinks 0.534        
cufflinks 0.76       High
cufflinks 0.475        
cufflinks 0.411       Low
cufflinks 0.575        
cufflinks 0.533        
cufflinks 0.382       Low
cufflinks 0.509        
cufflinks 0.539        
cufflinks 0.671        
cufflinks 0.613        
cufflinks 0.584        
cufflinks 0.324       Low
cufflinks 0.539        

0 Strain