Gene : Seita.8G157900 S. italica v2.2
Defline:  (1 of 1) PTHR23389 - CHROMOSOME TRANSMISSION FIDELITY FACTOR 18 Genomic Order:  1579
Name:  ? Seita.8G157900 Secondary Identifier:  ? PAC:32716865
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G157900 0.5kb upstream 0.5kb upstream 12859 true scaffold_8: 29868432-29881290 Setaria italica
Seita.8G157900 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 29868432-29868931 Setaria italica
Seita.8G157900 0.5kb downstream 0.5kb downstream 12859 true scaffold_8: 29868932-29881790 Setaria italica
Seita.8G157900 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 29881291-29881790 Setaria italica
Seita.8G157900 1.0kb upstream 1.0kb upstream 13359 true scaffold_8: 29867932-29881290 Setaria italica
Seita.8G157900 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 29867932-29868931 Setaria italica
Seita.8G157900 1.0kb downstream 1.0kb downstream 13359 true scaffold_8: 29868932-29882290 Setaria italica
Seita.8G157900 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 29881291-29882290 Setaria italica
Seita.8G157900 2.0kb upstream 2.0kb upstream 14359 true scaffold_8: 29866932-29881290 Setaria italica
Seita.8G157900 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 29866932-29868931 Setaria italica
Seita.8G157900 2.0kb downstream 2.0kb downstream 14359 true scaffold_8: 29868932-29883290 Setaria italica
Seita.8G157900 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 29881291-29883290 Setaria italica
Seita.8G157900 5.0kb upstream 5.0kb upstream 17359 true scaffold_8: 29863932-29881290 Setaria italica
Seita.8G157900 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 29863932-29868931 Setaria italica
Seita.8G157900 5.0kb downstream 5.0kb downstream 17359 true scaffold_8: 29868932-29886290 Setaria italica
Seita.8G157900 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 29881291-29886290 Setaria italica
Seita.8G157900 10.0kb upstream 10.0kb upstream 22359 true scaffold_8: 29858932-29881290 Setaria italica
Seita.8G157900 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 29858932-29868931 Setaria italica
Seita.8G157900 10.0kb downstream 10.0kb downstream 22359 true scaffold_8: 29868932-29891290 Setaria italica
Seita.8G157900 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 29881291-29891290 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041518 5273 Angiosperm View MSA
122176124 5267 Panicoideae View MSA
124589304 5269 Grass View MSA
121345302 5274 Embryophyte View MSA
123425414 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.479        
cufflinks 7.486       High
cufflinks 4.969        
cufflinks 4.363        
cufflinks 4.026        
cufflinks 8.311       High
cufflinks 5.344        
cufflinks 4.261        
cufflinks 5.153        
cufflinks 2.48       Low
cufflinks 4.979        
cufflinks 4.94        
cufflinks 4.679        
cufflinks 4.168        
cufflinks 5.225        
cufflinks 4.622        
cufflinks 4.605        
cufflinks 4.866        
cufflinks 2.853       Low
cufflinks 5.271        

0 Strain