Gene : Seita.8G094300 S. italica v2.2
Defline:  (1 of 1) PTHR10046//PTHR10046:SF51 - ATP DEPENDENT LON PROTEASE FAMILY MEMBER Genomic Order:  943
Name:  ? Seita.8G094300 Secondary Identifier:  ? PAC:32716537
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G094300 0.5kb upstream 0.5kb upstream 7962 true scaffold_8: 12007462-12015423 Setaria italica
Seita.8G094300 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12007462-12007961 Setaria italica
Seita.8G094300 0.5kb downstream 0.5kb downstream 7962 true scaffold_8: 12007962-12015923 Setaria italica
Seita.8G094300 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12015424-12015923 Setaria italica
Seita.8G094300 1.0kb upstream 1.0kb upstream 8462 true scaffold_8: 12006962-12015423 Setaria italica
Seita.8G094300 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12006962-12007961 Setaria italica
Seita.8G094300 1.0kb downstream 1.0kb downstream 8462 true scaffold_8: 12007962-12016423 Setaria italica
Seita.8G094300 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12015424-12016423 Setaria italica
Seita.8G094300 2.0kb upstream 2.0kb upstream 9462 true scaffold_8: 12005962-12015423 Setaria italica
Seita.8G094300 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12005962-12007961 Setaria italica
Seita.8G094300 2.0kb downstream 2.0kb downstream 9462 true scaffold_8: 12007962-12017423 Setaria italica
Seita.8G094300 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12015424-12017423 Setaria italica
Seita.8G094300 5.0kb upstream 5.0kb upstream 12462 true scaffold_8: 12002962-12015423 Setaria italica
Seita.8G094300 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12002962-12007961 Setaria italica
Seita.8G094300 5.0kb downstream 5.0kb downstream 12462 true scaffold_8: 12007962-12020423 Setaria italica
Seita.8G094300 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12015424-12020423 Setaria italica
Seita.8G094300 10.0kb upstream 10.0kb upstream 17462 true scaffold_8: 11997962-12015423 Setaria italica
Seita.8G094300 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 11997962-12007961 Setaria italica
Seita.8G094300 10.0kb downstream 10.0kb downstream 17462 true scaffold_8: 12007962-12025423 Setaria italica
Seita.8G094300 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12015424-12025423 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029609 5273 Angiosperm View MSA
122176333 5267 Panicoideae View MSA
124575417 5269 Grass View MSA
121347578 5274 Embryophyte View MSA
123425227 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.683        
cufflinks 1.218        
cufflinks 2.531        
cufflinks 1.804        
cufflinks 3.639        
cufflinks 1.491        
cufflinks 3.632        
cufflinks 5.931       High
cufflinks 5.619       High
cufflinks 1.047        
cufflinks 1.032        
cufflinks 0.169       Low
cufflinks 0.161     Low Low
cufflinks 2.569        
cufflinks 0.166       Low
cufflinks 3.909        
cufflinks 0.157       Low
cufflinks 0.81        
cufflinks 1.943        
cufflinks 0.117     Low Low

0 Strain