Gene : Seita.8G094700 S. italica v2.2
Defline:  (1 of 2) PTHR13301//PTHR13301:SF76 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  947
Name:  ? Seita.8G094700 Secondary Identifier:  ? PAC:32715317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G094700 0.5kb upstream 0.5kb upstream 4747 true scaffold_8: 12073276-12078022 Setaria italica
Seita.8G094700 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12077523-12078022 Setaria italica
Seita.8G094700 0.5kb downstream 0.5kb downstream 4747 true scaffold_8: 12072776-12077522 Setaria italica
Seita.8G094700 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12072776-12073275 Setaria italica
Seita.8G094700 1.0kb upstream 1.0kb upstream 5247 true scaffold_8: 12073276-12078522 Setaria italica
Seita.8G094700 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12077523-12078522 Setaria italica
Seita.8G094700 1.0kb downstream 1.0kb downstream 5247 true scaffold_8: 12072276-12077522 Setaria italica
Seita.8G094700 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12072276-12073275 Setaria italica
Seita.8G094700 2.0kb upstream 2.0kb upstream 6247 true scaffold_8: 12073276-12079522 Setaria italica
Seita.8G094700 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12077523-12079522 Setaria italica
Seita.8G094700 2.0kb downstream 2.0kb downstream 6247 true scaffold_8: 12071276-12077522 Setaria italica
Seita.8G094700 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12071276-12073275 Setaria italica
Seita.8G094700 5.0kb upstream 5.0kb upstream 9247 true scaffold_8: 12073276-12082522 Setaria italica
Seita.8G094700 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12077523-12082522 Setaria italica
Seita.8G094700 5.0kb downstream 5.0kb downstream 9247 true scaffold_8: 12068276-12077522 Setaria italica
Seita.8G094700 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12068276-12073275 Setaria italica
Seita.8G094700 10.0kb upstream 10.0kb upstream 14247 true scaffold_8: 12073276-12087522 Setaria italica
Seita.8G094700 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12077523-12087522 Setaria italica
Seita.8G094700 10.0kb downstream 10.0kb downstream 14247 true scaffold_8: 12063276-12077522 Setaria italica
Seita.8G094700 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12063276-12073275 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190497 5267 Panicoideae View MSA
124568643 5269 Grass View MSA
122048673 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.999        
cufflinks 5.399        
cufflinks 5.137        
cufflinks 4.045        
cufflinks 3.539       Low
cufflinks 7.025       High
cufflinks 4.532        
cufflinks 4.349        
cufflinks 3.056       Low
cufflinks 5.702        
cufflinks 5.606        
cufflinks 3.588       Low
cufflinks 5.573        
cufflinks 4.565        
cufflinks 6.513       High
cufflinks 3.704        
cufflinks 6.9       High
cufflinks 2.56       Low
cufflinks 5.354        
cufflinks 6.804       High

0 Strain