Gene : Seita.8G096000 S. italica v2.2
Defline:  (1 of 1) PTHR21495:SF59 - DIRIGENT PROTEIN 20-RELATED Genomic Order:  960
Name:  ? Seita.8G096000 Secondary Identifier:  ? PAC:32715322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G096000 0.5kb upstream 0.5kb upstream 1440 true scaffold_8: 12387549-12388988 Setaria italica
Seita.8G096000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12388489-12388988 Setaria italica
Seita.8G096000 0.5kb downstream 0.5kb downstream 1440 true scaffold_8: 12387049-12388488 Setaria italica
Seita.8G096000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12387049-12387548 Setaria italica
Seita.8G096000 1.0kb upstream 1.0kb upstream 1940 true scaffold_8: 12387549-12389488 Setaria italica
Seita.8G096000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12388489-12389488 Setaria italica
Seita.8G096000 1.0kb downstream 1.0kb downstream 1940 true scaffold_8: 12386549-12388488 Setaria italica
Seita.8G096000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12386549-12387548 Setaria italica
Seita.8G096000 2.0kb upstream 2.0kb upstream 2940 true scaffold_8: 12387549-12390488 Setaria italica
Seita.8G096000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12388489-12390488 Setaria italica
Seita.8G096000 2.0kb downstream 2.0kb downstream 2940 true scaffold_8: 12385549-12388488 Setaria italica
Seita.8G096000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12385549-12387548 Setaria italica
Seita.8G096000 5.0kb upstream 5.0kb upstream 5940 true scaffold_8: 12387549-12393488 Setaria italica
Seita.8G096000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12388489-12393488 Setaria italica
Seita.8G096000 5.0kb downstream 5.0kb downstream 5940 true scaffold_8: 12382549-12388488 Setaria italica
Seita.8G096000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12382549-12387548 Setaria italica
Seita.8G096000 10.0kb upstream 10.0kb upstream 10940 true scaffold_8: 12387549-12398488 Setaria italica
Seita.8G096000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12388489-12398488 Setaria italica
Seita.8G096000 10.0kb downstream 10.0kb downstream 10940 true scaffold_8: 12377549-12388488 Setaria italica
Seita.8G096000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12377549-12387548 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031282 5273 Angiosperm View MSA
122197717 5267 Panicoideae View MSA
124569585 5269 Grass View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low  
cufflinks 0.362        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.234        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  

0 Strain