Gene : Seita.8G097000 S. italica v2.2
Defline:  (1 of 2) PTHR11802//PTHR11802:SF20 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  970
Name:  ? Seita.8G097000 Secondary Identifier:  ? PAC:32717418
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G097000 0.5kb upstream 0.5kb upstream 4194 true scaffold_8: 12638699-12642892 Setaria italica
Seita.8G097000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12638699-12639198 Setaria italica
Seita.8G097000 0.5kb downstream 0.5kb downstream 4194 true scaffold_8: 12639199-12643392 Setaria italica
Seita.8G097000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12642893-12643392 Setaria italica
Seita.8G097000 1.0kb upstream 1.0kb upstream 4694 true scaffold_8: 12638199-12642892 Setaria italica
Seita.8G097000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12638199-12639198 Setaria italica
Seita.8G097000 1.0kb downstream 1.0kb downstream 4694 true scaffold_8: 12639199-12643892 Setaria italica
Seita.8G097000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12642893-12643892 Setaria italica
Seita.8G097000 2.0kb upstream 2.0kb upstream 5694 true scaffold_8: 12637199-12642892 Setaria italica
Seita.8G097000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12637199-12639198 Setaria italica
Seita.8G097000 2.0kb downstream 2.0kb downstream 5694 true scaffold_8: 12639199-12644892 Setaria italica
Seita.8G097000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12642893-12644892 Setaria italica
Seita.8G097000 5.0kb upstream 5.0kb upstream 8694 true scaffold_8: 12634199-12642892 Setaria italica
Seita.8G097000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12634199-12639198 Setaria italica
Seita.8G097000 5.0kb downstream 5.0kb downstream 8694 true scaffold_8: 12639199-12647892 Setaria italica
Seita.8G097000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12642893-12647892 Setaria italica
Seita.8G097000 10.0kb upstream 10.0kb upstream 13694 true scaffold_8: 12629199-12642892 Setaria italica
Seita.8G097000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12629199-12639198 Setaria italica
Seita.8G097000 10.0kb downstream 10.0kb downstream 13694 true scaffold_8: 12639199-12652892 Setaria italica
Seita.8G097000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12642893-12652892 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194147 5267 Panicoideae View MSA
124574828 5269 Grass View MSA
122043115 5273 Angiosperm View MSA
121351274 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.673        
cufflinks 8.477       High
cufflinks 0.449       Low
cufflinks 2.878        
cufflinks 2.392        
cufflinks 9.61       High
cufflinks 5.012        
cufflinks 5.092        
cufflinks 3.881        
cufflinks 2.169        
cufflinks 2.138        
cufflinks 0.827        
cufflinks 0.236       Low
cufflinks 0.5       Low
cufflinks 3.914        
cufflinks 0.55        
cufflinks 0.703        
cufflinks 0.782        
cufflinks 0.201       Low
cufflinks 2.705        

0 Strain