Gene : Seita.8G096900 S. italica v2.2
Defline:  (1 of 1) PTHR12606//PTHR12606:SF38 - SENTRIN/SUMO-SPECIFIC PROTEASE Genomic Order:  969
Name:  ? Seita.8G096900 Secondary Identifier:  ? PAC:32717939
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G096900 0.5kb upstream 0.5kb upstream 6534 true scaffold_8: 12628531-12635064 Setaria italica
Seita.8G096900 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 12628531-12629030 Setaria italica
Seita.8G096900 0.5kb downstream 0.5kb downstream 6534 true scaffold_8: 12629031-12635564 Setaria italica
Seita.8G096900 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 12635065-12635564 Setaria italica
Seita.8G096900 1.0kb upstream 1.0kb upstream 7034 true scaffold_8: 12628031-12635064 Setaria italica
Seita.8G096900 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 12628031-12629030 Setaria italica
Seita.8G096900 1.0kb downstream 1.0kb downstream 7034 true scaffold_8: 12629031-12636064 Setaria italica
Seita.8G096900 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 12635065-12636064 Setaria italica
Seita.8G096900 2.0kb upstream 2.0kb upstream 8034 true scaffold_8: 12627031-12635064 Setaria italica
Seita.8G096900 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 12627031-12629030 Setaria italica
Seita.8G096900 2.0kb downstream 2.0kb downstream 8034 true scaffold_8: 12629031-12637064 Setaria italica
Seita.8G096900 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 12635065-12637064 Setaria italica
Seita.8G096900 5.0kb upstream 5.0kb upstream 11034 true scaffold_8: 12624031-12635064 Setaria italica
Seita.8G096900 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 12624031-12629030 Setaria italica
Seita.8G096900 5.0kb downstream 5.0kb downstream 11034 true scaffold_8: 12629031-12640064 Setaria italica
Seita.8G096900 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 12635065-12640064 Setaria italica
Seita.8G096900 10.0kb upstream 10.0kb upstream 16034 true scaffold_8: 12619031-12635064 Setaria italica
Seita.8G096900 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 12619031-12629030 Setaria italica
Seita.8G096900 10.0kb downstream 10.0kb downstream 16034 true scaffold_8: 12629031-12645064 Setaria italica
Seita.8G096900 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 12635065-12645064 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176628 5267 Panicoideae View MSA
124581726 5269 Grass View MSA
122049176 5273 Angiosperm View MSA
123429184 5275 Viridiplantae View MSA
121311282 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.94        
cufflinks 6.163       High
cufflinks 0.576       Low
cufflinks 0.725       Low
cufflinks 0.553       Low
cufflinks 5.864       High
cufflinks 1.912        
cufflinks 1.625        
cufflinks 0.969        
cufflinks 1.683        
cufflinks 2.546        
cufflinks 2.258        
cufflinks 1.606        
cufflinks 0.748       Low
cufflinks 1.826        
cufflinks 2.292        
cufflinks 2.086        
cufflinks 2.25        
cufflinks 0.837       Low
cufflinks 1.771        

0 Strain