Gene : Seita.8G102800 S. italica v2.2
Defline:  (1 of 2) 1.1.1.62 - 17-beta-estradiol 17-dehydrogenase / Estrogen 17-oxidoreductase Genomic Order:  1028
Name:  ? Seita.8G102800 Secondary Identifier:  ? PAC:32716930
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G102800 0.5kb upstream 0.5kb upstream 5514 true scaffold_8: 13812409-13817922 Setaria italica
Seita.8G102800 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13812409-13812908 Setaria italica
Seita.8G102800 0.5kb downstream 0.5kb downstream 5514 true scaffold_8: 13812909-13818422 Setaria italica
Seita.8G102800 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13817923-13818422 Setaria italica
Seita.8G102800 1.0kb upstream 1.0kb upstream 6014 true scaffold_8: 13811909-13817922 Setaria italica
Seita.8G102800 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13811909-13812908 Setaria italica
Seita.8G102800 1.0kb downstream 1.0kb downstream 6014 true scaffold_8: 13812909-13818922 Setaria italica
Seita.8G102800 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13817923-13818922 Setaria italica
Seita.8G102800 2.0kb upstream 2.0kb upstream 7014 true scaffold_8: 13810909-13817922 Setaria italica
Seita.8G102800 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13810909-13812908 Setaria italica
Seita.8G102800 2.0kb downstream 2.0kb downstream 7014 true scaffold_8: 13812909-13819922 Setaria italica
Seita.8G102800 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13817923-13819922 Setaria italica
Seita.8G102800 5.0kb upstream 5.0kb upstream 10014 true scaffold_8: 13807909-13817922 Setaria italica
Seita.8G102800 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13807909-13812908 Setaria italica
Seita.8G102800 5.0kb downstream 5.0kb downstream 10014 true scaffold_8: 13812909-13822922 Setaria italica
Seita.8G102800 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13817923-13822922 Setaria italica
Seita.8G102800 10.0kb upstream 10.0kb upstream 15014 true scaffold_8: 13802909-13817922 Setaria italica
Seita.8G102800 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13802909-13812908 Setaria italica
Seita.8G102800 10.0kb downstream 10.0kb downstream 15014 true scaffold_8: 13812909-13827922 Setaria italica
Seita.8G102800 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13817923-13827922 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181571 5267 Panicoideae View MSA
124568644 5269 Grass View MSA
122042430 5273 Angiosperm View MSA
121346750 5274 Embryophyte View MSA
123424961 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.464        
cufflinks 9.537       High
cufflinks 9.635       High
cufflinks 8.482        
cufflinks 6.621        
cufflinks 10.49       High
cufflinks 5.794        
cufflinks 8.63        
cufflinks 5.999        
cufflinks 5.688        
cufflinks 5.247       Low
cufflinks 6.158        
cufflinks 8.171        
cufflinks 8.544        
cufflinks 9.096        
cufflinks 4.819       Low
cufflinks 7.694        
cufflinks 3.865       Low
cufflinks 5.621        
cufflinks 8.411        

0 Strain