Gene : Seita.8G101300 S. italica v2.2
Defline:  (1 of 8) PF06974 - Protein of unknown function (DUF1298) (DUF1298) Genomic Order:  1013
Name:  ? Seita.8G101300 Secondary Identifier:  ? PAC:32715656
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G101300 0.5kb upstream 0.5kb upstream 1997 true scaffold_8: 13499813-13501809 Setaria italica
Seita.8G101300 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13501310-13501809 Setaria italica
Seita.8G101300 0.5kb downstream 0.5kb downstream 1997 true scaffold_8: 13499313-13501309 Setaria italica
Seita.8G101300 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13499313-13499812 Setaria italica
Seita.8G101300 1.0kb upstream 1.0kb upstream 2497 true scaffold_8: 13499813-13502309 Setaria italica
Seita.8G101300 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13501310-13502309 Setaria italica
Seita.8G101300 1.0kb downstream 1.0kb downstream 2497 true scaffold_8: 13498813-13501309 Setaria italica
Seita.8G101300 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13498813-13499812 Setaria italica
Seita.8G101300 2.0kb upstream 2.0kb upstream 3497 true scaffold_8: 13499813-13503309 Setaria italica
Seita.8G101300 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13501310-13503309 Setaria italica
Seita.8G101300 2.0kb downstream 2.0kb downstream 3497 true scaffold_8: 13497813-13501309 Setaria italica
Seita.8G101300 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13497813-13499812 Setaria italica
Seita.8G101300 5.0kb upstream 5.0kb upstream 6497 true scaffold_8: 13499813-13506309 Setaria italica
Seita.8G101300 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13501310-13506309 Setaria italica
Seita.8G101300 5.0kb downstream 5.0kb downstream 6497 true scaffold_8: 13494813-13501309 Setaria italica
Seita.8G101300 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13494813-13499812 Setaria italica
Seita.8G101300 10.0kb upstream 10.0kb upstream 11497 true scaffold_8: 13499813-13511309 Setaria italica
Seita.8G101300 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13501310-13511309 Setaria italica
Seita.8G101300 10.0kb downstream 10.0kb downstream 11497 true scaffold_8: 13489813-13501309 Setaria italica
Seita.8G101300 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13489813-13499812 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122054987 5267 Panicoideae Singleton cluster - no MSA
124354790 5269 Grass Singleton cluster - no MSA
122049272 5273 Angiosperm View MSA
121311322 5274 Embryophyte View MSA
123348632 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.113     Low  
cufflinks 0.332        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.226        
cufflinks 1.668       High
cufflinks 0.107     Low  
cufflinks 0.792       High
cufflinks 0.579       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.306        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.11     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.082     Low  
cufflinks 0.013     Low Low
cufflinks 0.022     Low Low
cufflinks 0.012     Low Low
cufflinks 0.057     Low  
cufflinks 0.046     Low  

0 Strain