Gene : Seita.8G102100 S. italica v2.2
Defline:  (1 of 1) PTHR14289:SF16 - F-BOX ONLY PROTEIN 3 Genomic Order:  1021
Name:  ? Seita.8G102100 Secondary Identifier:  ? PAC:32715988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G102100 0.5kb upstream 0.5kb upstream 6170 true scaffold_8: 13644140-13650309 Setaria italica
Seita.8G102100 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13649810-13650309 Setaria italica
Seita.8G102100 0.5kb downstream 0.5kb downstream 6170 true scaffold_8: 13643640-13649809 Setaria italica
Seita.8G102100 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13643640-13644139 Setaria italica
Seita.8G102100 1.0kb upstream 1.0kb upstream 6670 true scaffold_8: 13644140-13650809 Setaria italica
Seita.8G102100 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13649810-13650809 Setaria italica
Seita.8G102100 1.0kb downstream 1.0kb downstream 6670 true scaffold_8: 13643140-13649809 Setaria italica
Seita.8G102100 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13643140-13644139 Setaria italica
Seita.8G102100 2.0kb upstream 2.0kb upstream 7670 true scaffold_8: 13644140-13651809 Setaria italica
Seita.8G102100 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13649810-13651809 Setaria italica
Seita.8G102100 2.0kb downstream 2.0kb downstream 7670 true scaffold_8: 13642140-13649809 Setaria italica
Seita.8G102100 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13642140-13644139 Setaria italica
Seita.8G102100 5.0kb upstream 5.0kb upstream 10670 true scaffold_8: 13644140-13654809 Setaria italica
Seita.8G102100 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13649810-13654809 Setaria italica
Seita.8G102100 5.0kb downstream 5.0kb downstream 10670 true scaffold_8: 13639140-13649809 Setaria italica
Seita.8G102100 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13639140-13644139 Setaria italica
Seita.8G102100 10.0kb upstream 10.0kb upstream 15670 true scaffold_8: 13644140-13659809 Setaria italica
Seita.8G102100 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13649810-13659809 Setaria italica
Seita.8G102100 10.0kb downstream 10.0kb downstream 15670 true scaffold_8: 13634140-13649809 Setaria italica
Seita.8G102100 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13634140-13644139 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176128 5267 Panicoideae View MSA
124572673 5269 Grass View MSA
122044977 5273 Angiosperm View MSA
121344858 5274 Embryophyte View MSA
123425488 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.423        
cufflinks 6.925        
cufflinks 6.823        
cufflinks 6.313        
cufflinks 5.836        
cufflinks 6.972        
cufflinks 7.029        
cufflinks 5.587        
cufflinks 5.534        
cufflinks 4.198       Low
cufflinks 6.125        
cufflinks 8.47        
cufflinks 7.912        
cufflinks 6.869        
cufflinks 7.235        
cufflinks 9.49       High
cufflinks 8.07        
cufflinks 18.096     High High
cufflinks 5.951        
cufflinks 7.1        

0 Strain