Gene : Seita.8G103700 S. italica v2.2
Defline:  (1 of 63) PF00892 - EamA-like transporter family (EamA) Genomic Order:  1037
Name:  ? Seita.8G103700 Secondary Identifier:  ? PAC:32714855
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G103700 0.5kb upstream 0.5kb upstream 4866 true scaffold_8: 13915868-13920733 Setaria italica
Seita.8G103700 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 13915868-13916367 Setaria italica
Seita.8G103700 0.5kb downstream 0.5kb downstream 4866 true scaffold_8: 13916368-13921233 Setaria italica
Seita.8G103700 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 13920734-13921233 Setaria italica
Seita.8G103700 1.0kb upstream 1.0kb upstream 5366 true scaffold_8: 13915368-13920733 Setaria italica
Seita.8G103700 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 13915368-13916367 Setaria italica
Seita.8G103700 1.0kb downstream 1.0kb downstream 5366 true scaffold_8: 13916368-13921733 Setaria italica
Seita.8G103700 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 13920734-13921733 Setaria italica
Seita.8G103700 2.0kb upstream 2.0kb upstream 6366 true scaffold_8: 13914368-13920733 Setaria italica
Seita.8G103700 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 13914368-13916367 Setaria italica
Seita.8G103700 2.0kb downstream 2.0kb downstream 6366 true scaffold_8: 13916368-13922733 Setaria italica
Seita.8G103700 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 13920734-13922733 Setaria italica
Seita.8G103700 5.0kb upstream 5.0kb upstream 9366 true scaffold_8: 13911368-13920733 Setaria italica
Seita.8G103700 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 13911368-13916367 Setaria italica
Seita.8G103700 5.0kb downstream 5.0kb downstream 9366 true scaffold_8: 13916368-13925733 Setaria italica
Seita.8G103700 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 13920734-13925733 Setaria italica
Seita.8G103700 10.0kb upstream 10.0kb upstream 14366 true scaffold_8: 13906368-13920733 Setaria italica
Seita.8G103700 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 13906368-13916367 Setaria italica
Seita.8G103700 10.0kb downstream 10.0kb downstream 14366 true scaffold_8: 13916368-13930733 Setaria italica
Seita.8G103700 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 13920734-13930733 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026670 5273 Angiosperm View MSA
122116758 5267 Panicoideae View MSA
124411168 5269 Grass View MSA
121296466 5274 Embryophyte View MSA
123334621 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.439        
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.013     Low  
cufflinks 0.028     Low  
cufflinks 0.005     Low Low
cufflinks 1.335        
cufflinks 0.097     Low  
cufflinks 1.859        
cufflinks 6.111       High
cufflinks 0.067     Low  
cufflinks 7.341       High
cufflinks 0.033     Low  
cufflinks 7.795       High
cufflinks 0.045     Low  
cufflinks 0.022     Low  
cufflinks 4.324       High

0 Strain