Gene : Seita.8G117000 S. italica v2.2
Genomic Order:  1170 Name:  ? Seita.8G117000
Secondary Identifier:  ? PAC:32715707
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G117000 0.5kb upstream 0.5kb upstream 1838 true scaffold_8: 21745859-21747696 Setaria italica
Seita.8G117000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 21745859-21746358 Setaria italica
Seita.8G117000 0.5kb downstream 0.5kb downstream 1838 true scaffold_8: 21746359-21748196 Setaria italica
Seita.8G117000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 21747697-21748196 Setaria italica
Seita.8G117000 1.0kb upstream 1.0kb upstream 2338 true scaffold_8: 21745359-21747696 Setaria italica
Seita.8G117000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 21745359-21746358 Setaria italica
Seita.8G117000 1.0kb downstream 1.0kb downstream 2338 true scaffold_8: 21746359-21748696 Setaria italica
Seita.8G117000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 21747697-21748696 Setaria italica
Seita.8G117000 2.0kb upstream 2.0kb upstream 3338 true scaffold_8: 21744359-21747696 Setaria italica
Seita.8G117000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 21744359-21746358 Setaria italica
Seita.8G117000 2.0kb downstream 2.0kb downstream 3338 true scaffold_8: 21746359-21749696 Setaria italica
Seita.8G117000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 21747697-21749696 Setaria italica
Seita.8G117000 5.0kb upstream 5.0kb upstream 6338 true scaffold_8: 21741359-21747696 Setaria italica
Seita.8G117000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 21741359-21746358 Setaria italica
Seita.8G117000 5.0kb downstream 5.0kb downstream 6338 true scaffold_8: 21746359-21752696 Setaria italica
Seita.8G117000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 21747697-21752696 Setaria italica
Seita.8G117000 10.0kb upstream 10.0kb upstream 11338 true scaffold_8: 21736359-21747696 Setaria italica
Seita.8G117000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 21736359-21746358 Setaria italica
Seita.8G117000 10.0kb downstream 10.0kb downstream 11338 true scaffold_8: 21746359-21757696 Setaria italica
Seita.8G117000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 21747697-21757696 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191224 5267 Panicoideae View MSA
124587961 5269 Grass View MSA
122048705 5273 Angiosperm View MSA
121347737 5274 Embryophyte View MSA
123380610 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.993        
cufflinks 22.721     High High
cufflinks 0.195        
cufflinks 0.056     Low Low
cufflinks 0.74        
cufflinks 26.952     High High
cufflinks 12.251       High
cufflinks 9.395        
cufflinks 7.366        
cufflinks 10.99       High
cufflinks 6.969        
cufflinks 0.184        
cufflinks 0.177        
cufflinks 0.223        
cufflinks 0.113     Low Low
cufflinks 3.989        
cufflinks 0.218        
cufflinks 0.906        
cufflinks 0.481        
cufflinks 0.176        

0 Strain