Gene : Seita.8G121000 S. italica v2.2
Defline:  (1 of 2) KOG4816 - Uncharacterized conserved protein Genomic Order:  1210
Name:  ? Seita.8G121000 Secondary Identifier:  ? PAC:32717058
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G121000 0.5kb upstream 0.5kb upstream 6017 true scaffold_8: 22962999-22969015 Setaria italica
Seita.8G121000 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 22962999-22963498 Setaria italica
Seita.8G121000 0.5kb downstream 0.5kb downstream 6017 true scaffold_8: 22963499-22969515 Setaria italica
Seita.8G121000 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 22969016-22969515 Setaria italica
Seita.8G121000 1.0kb upstream 1.0kb upstream 6517 true scaffold_8: 22962499-22969015 Setaria italica
Seita.8G121000 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 22962499-22963498 Setaria italica
Seita.8G121000 1.0kb downstream 1.0kb downstream 6517 true scaffold_8: 22963499-22970015 Setaria italica
Seita.8G121000 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 22969016-22970015 Setaria italica
Seita.8G121000 2.0kb upstream 2.0kb upstream 7517 true scaffold_8: 22961499-22969015 Setaria italica
Seita.8G121000 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 22961499-22963498 Setaria italica
Seita.8G121000 2.0kb downstream 2.0kb downstream 7517 true scaffold_8: 22963499-22971015 Setaria italica
Seita.8G121000 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 22969016-22971015 Setaria italica
Seita.8G121000 5.0kb upstream 5.0kb upstream 10517 true scaffold_8: 22958499-22969015 Setaria italica
Seita.8G121000 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 22958499-22963498 Setaria italica
Seita.8G121000 5.0kb downstream 5.0kb downstream 10517 true scaffold_8: 22963499-22974015 Setaria italica
Seita.8G121000 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 22969016-22974015 Setaria italica
Seita.8G121000 10.0kb upstream 10.0kb upstream 15517 true scaffold_8: 22953499-22969015 Setaria italica
Seita.8G121000 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 22953499-22963498 Setaria italica
Seita.8G121000 10.0kb downstream 10.0kb downstream 15517 true scaffold_8: 22963499-22979015 Setaria italica
Seita.8G121000 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 22969016-22979015 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196793 5267 Panicoideae View MSA
124588892 5269 Grass View MSA
122045612 5273 Angiosperm View MSA
121347246 5274 Embryophyte View MSA
123425668 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.641        
cufflinks 2.76       High
cufflinks 1.091       Low
cufflinks 1.179       Low
cufflinks 1.158       Low
cufflinks 2.521        
cufflinks 1.569        
cufflinks 3.047       High
cufflinks 1.548        
cufflinks 2.951       High
cufflinks 1.781        
cufflinks 2.32        
cufflinks 2.033        
cufflinks 1.65        
cufflinks 2.604        
cufflinks 1.086       Low
cufflinks 3.029       High
cufflinks 1.267        
cufflinks 1.094       Low
cufflinks 2.782       High

0 Strain