Gene : Seita.8G124600 S. italica v2.2
Defline:  (1 of 3) KOG2014 - SMT3/SUMO-activating complex, AOS1/RAD31 component Genomic Order:  1246
Name:  ? Seita.8G124600 Secondary Identifier:  ? PAC:32716377
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G124600 0.5kb upstream 0.5kb upstream 6582 true scaffold_8: 23801939-23808520 Setaria italica
Seita.8G124600 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 23808021-23808520 Setaria italica
Seita.8G124600 0.5kb downstream 0.5kb downstream 6582 true scaffold_8: 23801439-23808020 Setaria italica
Seita.8G124600 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 23801439-23801938 Setaria italica
Seita.8G124600 1.0kb upstream 1.0kb upstream 7082 true scaffold_8: 23801939-23809020 Setaria italica
Seita.8G124600 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 23808021-23809020 Setaria italica
Seita.8G124600 1.0kb downstream 1.0kb downstream 7082 true scaffold_8: 23800939-23808020 Setaria italica
Seita.8G124600 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 23800939-23801938 Setaria italica
Seita.8G124600 2.0kb upstream 2.0kb upstream 8082 true scaffold_8: 23801939-23810020 Setaria italica
Seita.8G124600 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 23808021-23810020 Setaria italica
Seita.8G124600 2.0kb downstream 2.0kb downstream 8082 true scaffold_8: 23799939-23808020 Setaria italica
Seita.8G124600 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 23799939-23801938 Setaria italica
Seita.8G124600 5.0kb upstream 5.0kb upstream 11082 true scaffold_8: 23801939-23813020 Setaria italica
Seita.8G124600 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 23808021-23813020 Setaria italica
Seita.8G124600 5.0kb downstream 5.0kb downstream 11082 true scaffold_8: 23796939-23808020 Setaria italica
Seita.8G124600 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 23796939-23801938 Setaria italica
Seita.8G124600 10.0kb upstream 10.0kb upstream 16082 true scaffold_8: 23801939-23818020 Setaria italica
Seita.8G124600 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 23808021-23818020 Setaria italica
Seita.8G124600 10.0kb downstream 10.0kb downstream 16082 true scaffold_8: 23791939-23808020 Setaria italica
Seita.8G124600 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 23791939-23801938 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041218 5273 Angiosperm View MSA
122192870 5267 Panicoideae View MSA
124573638 5269 Grass View MSA
121348552 5274 Embryophyte View MSA
123424130 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.073        
cufflinks 8.983        
cufflinks 6.726        
cufflinks 7.485        
cufflinks 6.219        
cufflinks 9.128        
cufflinks 4.352       Low
cufflinks 9.063        
cufflinks 4.577       Low
cufflinks 9.903       High
cufflinks 5.678        
cufflinks 7.876        
cufflinks 6.616        
cufflinks 6.612        
cufflinks 9.157        
cufflinks 4.182       Low
cufflinks 10.606       High
cufflinks 7.065        
cufflinks 4.86       Low
cufflinks 7.916        

0 Strain