Gene : Seita.8G222800 S. italica v2.2
Defline:  (1 of 1) PTHR11991 - TRANSLATIONALLY CONTROLLED TUMOR PROTEIN-RELATED Genomic Order:  2228
Name:  ? Seita.8G222800 Secondary Identifier:  ? PAC:32715429
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G222800 0.5kb upstream 0.5kb upstream 3014 true scaffold_8: 37564904-37567917 Setaria italica
Seita.8G222800 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 37567418-37567917 Setaria italica
Seita.8G222800 0.5kb downstream 0.5kb downstream 3014 true scaffold_8: 37564404-37567417 Setaria italica
Seita.8G222800 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 37564404-37564903 Setaria italica
Seita.8G222800 1.0kb upstream 1.0kb upstream 3514 true scaffold_8: 37564904-37568417 Setaria italica
Seita.8G222800 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 37567418-37568417 Setaria italica
Seita.8G222800 1.0kb downstream 1.0kb downstream 3514 true scaffold_8: 37563904-37567417 Setaria italica
Seita.8G222800 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 37563904-37564903 Setaria italica
Seita.8G222800 2.0kb upstream 2.0kb upstream 4514 true scaffold_8: 37564904-37569417 Setaria italica
Seita.8G222800 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 37567418-37569417 Setaria italica
Seita.8G222800 2.0kb downstream 2.0kb downstream 4514 true scaffold_8: 37562904-37567417 Setaria italica
Seita.8G222800 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 37562904-37564903 Setaria italica
Seita.8G222800 5.0kb upstream 5.0kb upstream 7514 true scaffold_8: 37564904-37572417 Setaria italica
Seita.8G222800 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 37567418-37572417 Setaria italica
Seita.8G222800 5.0kb downstream 5.0kb downstream 7514 true scaffold_8: 37559904-37567417 Setaria italica
Seita.8G222800 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 37559904-37564903 Setaria italica
Seita.8G222800 10.0kb upstream 10.0kb upstream 12514 true scaffold_8: 37564904-37577417 Setaria italica
Seita.8G222800 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 37567418-37577417 Setaria italica
Seita.8G222800 10.0kb downstream 10.0kb downstream 12514 true scaffold_8: 37554904-37567417 Setaria italica
Seita.8G222800 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 37554904-37564903 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175224 5267 Panicoideae View MSA
124569538 5269 Grass View MSA
122046002 5273 Angiosperm View MSA
121343936 5274 Embryophyte View MSA
123424738 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 630.154     High High
cufflinks 283.543     High  
cufflinks 186.992     High Low
cufflinks 210.685     High Low
cufflinks 207.9     High Low
cufflinks 320.002     High  
cufflinks 357.757     High  
cufflinks 275.591     High  
cufflinks 277.258     High  
cufflinks 663.003     High High
cufflinks 426.875     High  
cufflinks 597.837     High High
cufflinks 437.623     High  
cufflinks 235.463     High  
cufflinks 333.806     High  
cufflinks 543.983     High  
cufflinks 615.988     High High
cufflinks 647.647     High High
cufflinks 211.417     High Low
cufflinks 471.304     High  

0 Strain