Gene : Seita.8G249500 S. italica v2.2
Defline:  (1 of 7) PF01439 - Metallothionein (Metallothio_2) Genomic Order:  2495
Name:  ? Seita.8G249500 Secondary Identifier:  ? PAC:32716181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G249500 0.5kb upstream 0.5kb upstream 1430 true scaffold_8: 40361609-40363038 Setaria italica
Seita.8G249500 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 40361609-40362108 Setaria italica
Seita.8G249500 0.5kb downstream 0.5kb downstream 1430 true scaffold_8: 40362109-40363538 Setaria italica
Seita.8G249500 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 40363039-40363538 Setaria italica
Seita.8G249500 1.0kb upstream 1.0kb upstream 1930 true scaffold_8: 40361109-40363038 Setaria italica
Seita.8G249500 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 40361109-40362108 Setaria italica
Seita.8G249500 1.0kb downstream 1.0kb downstream 1930 true scaffold_8: 40362109-40364038 Setaria italica
Seita.8G249500 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 40363039-40364038 Setaria italica
Seita.8G249500 2.0kb upstream 2.0kb upstream 2930 true scaffold_8: 40360109-40363038 Setaria italica
Seita.8G249500 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 40360109-40362108 Setaria italica
Seita.8G249500 2.0kb downstream 2.0kb downstream 2930 true scaffold_8: 40362109-40365038 Setaria italica
Seita.8G249500 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 40363039-40365038 Setaria italica
Seita.8G249500 5.0kb upstream 5.0kb upstream 5930 true scaffold_8: 40357109-40363038 Setaria italica
Seita.8G249500 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 40357109-40362108 Setaria italica
Seita.8G249500 5.0kb downstream 5.0kb downstream 5930 true scaffold_8: 40362109-40368038 Setaria italica
Seita.8G249500 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 40363039-40368038 Setaria italica
Seita.8G249500 10.0kb upstream 10.0kb upstream 10930 true scaffold_8: 40352109-40363038 Setaria italica
Seita.8G249500 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 40352109-40362108 Setaria italica
Seita.8G249500 10.0kb downstream 10.0kb downstream 10930 true scaffold_8: 40362109-40373038 Setaria italica
Seita.8G249500 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 40363039-40373038 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194041 5267 Panicoideae View MSA
124590261 5269 Grass View MSA
122044110 5273 Angiosperm View MSA
121310239 5274 Embryophyte View MSA
123347784 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 394.605     High  
cufflinks 193.748     High Low
cufflinks 1638.202     High  
cufflinks 1759.045     High  
cufflinks 648.344     High  
cufflinks 158.914     High Low
cufflinks 956.185     High  
cufflinks 739.047     High  
cufflinks 179.183     High Low
cufflinks 1914.799     High  
cufflinks 482.573     High  
cufflinks 2948.649     High High
cufflinks 2444.342     High  
cufflinks 2683.98     High  
cufflinks 1243.771     High  
cufflinks 998.591     High  
cufflinks 4453.348     High High
cufflinks 365.366     High  
cufflinks 2168.76     High  
cufflinks 2707.334     High High

0 Strain