Gene : Seita.8G252200 S. italica v2.2
Defline:  (1 of 4) KOG0753 - Mitochondrial fatty acid anion carrier protein/Uncoupling protein Genomic Order:  2522
Name:  ? Seita.8G252200 Secondary Identifier:  ? PAC:32717146
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G252200 0.5kb upstream 0.5kb upstream 3857 true scaffold_8: 40578830-40582686 Setaria italica
Seita.8G252200 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 40578830-40579329 Setaria italica
Seita.8G252200 0.5kb downstream 0.5kb downstream 3857 true scaffold_8: 40579330-40583186 Setaria italica
Seita.8G252200 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 40582687-40583186 Setaria italica
Seita.8G252200 1.0kb upstream 1.0kb upstream 4357 true scaffold_8: 40578330-40582686 Setaria italica
Seita.8G252200 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 40578330-40579329 Setaria italica
Seita.8G252200 1.0kb downstream 1.0kb downstream 4357 true scaffold_8: 40579330-40583686 Setaria italica
Seita.8G252200 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 40582687-40583686 Setaria italica
Seita.8G252200 2.0kb upstream 2.0kb upstream 5357 true scaffold_8: 40577330-40582686 Setaria italica
Seita.8G252200 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 40577330-40579329 Setaria italica
Seita.8G252200 2.0kb downstream 2.0kb downstream 5357 true scaffold_8: 40579330-40584686 Setaria italica
Seita.8G252200 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 40582687-40584686 Setaria italica
Seita.8G252200 5.0kb upstream 5.0kb upstream 8357 true scaffold_8: 40574330-40582686 Setaria italica
Seita.8G252200 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 40574330-40579329 Setaria italica
Seita.8G252200 5.0kb downstream 5.0kb downstream 8357 true scaffold_8: 40579330-40587686 Setaria italica
Seita.8G252200 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 40582687-40587686 Setaria italica
Seita.8G252200 10.0kb upstream 10.0kb upstream 13357 true scaffold_8: 40569330-40582686 Setaria italica
Seita.8G252200 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 40569330-40579329 Setaria italica
Seita.8G252200 10.0kb downstream 10.0kb downstream 13357 true scaffold_8: 40579330-40592686 Setaria italica
Seita.8G252200 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 40582687-40592686 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184757 5267 Panicoideae View MSA
124580142 5269 Grass View MSA
122041708 5273 Angiosperm View MSA
121344455 5274 Embryophyte View MSA
123424548 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.614        
cufflinks 9.13        
cufflinks 5.604        
cufflinks 6.872        
cufflinks 8.76        
cufflinks 10.483        
cufflinks 5.829        
cufflinks 13.46     High  
cufflinks 8.318        
cufflinks 26.806     High High
cufflinks 16.363     High  
cufflinks 12.502        
cufflinks 22.061     High High
cufflinks 6.303        
cufflinks 15.737     High  
cufflinks 1.699       Low
cufflinks 15.864     High  
cufflinks 1.504       Low
cufflinks 4.184        
cufflinks 16.048     High  

0 Strain