Gene : Seita.8G252300 S. italica v2.2
Defline:  (1 of 1) PTHR21660//PTHR21660:SF8 - THIOESTERASE SUPERFAMILY MEMBER-RELATED Genomic Order:  2523
Name:  ? Seita.8G252300 Secondary Identifier:  ? PAC:32715949
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-1121 Setaria italica pathologic  
Sitalica PWY-321 Setaria italica pathologic  
Sitalica PWY-5148 Setaria italica pathologic  
Sitalica PWY-6733 Setaria italica pathologic  
Sitalica PWY-735 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G252300 0.5kb upstream 0.5kb upstream 1016 true scaffold_8: 40582932-40583947 Setaria italica
Seita.8G252300 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 40583448-40583947 Setaria italica
Seita.8G252300 0.5kb downstream 0.5kb downstream 1016 true scaffold_8: 40582432-40583447 Setaria italica
Seita.8G252300 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 40582432-40582931 Setaria italica
Seita.8G252300 1.0kb upstream 1.0kb upstream 1516 true scaffold_8: 40582932-40584447 Setaria italica
Seita.8G252300 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 40583448-40584447 Setaria italica
Seita.8G252300 1.0kb downstream 1.0kb downstream 1516 true scaffold_8: 40581932-40583447 Setaria italica
Seita.8G252300 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 40581932-40582931 Setaria italica
Seita.8G252300 2.0kb upstream 2.0kb upstream 2516 true scaffold_8: 40582932-40585447 Setaria italica
Seita.8G252300 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 40583448-40585447 Setaria italica
Seita.8G252300 2.0kb downstream 2.0kb downstream 2516 true scaffold_8: 40580932-40583447 Setaria italica
Seita.8G252300 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 40580932-40582931 Setaria italica
Seita.8G252300 5.0kb upstream 5.0kb upstream 5516 true scaffold_8: 40582932-40588447 Setaria italica
Seita.8G252300 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 40583448-40588447 Setaria italica
Seita.8G252300 5.0kb downstream 5.0kb downstream 5516 true scaffold_8: 40577932-40583447 Setaria italica
Seita.8G252300 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 40577932-40582931 Setaria italica
Seita.8G252300 10.0kb upstream 10.0kb upstream 10516 true scaffold_8: 40582932-40593447 Setaria italica
Seita.8G252300 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 40583448-40593447 Setaria italica
Seita.8G252300 10.0kb downstream 10.0kb downstream 10516 true scaffold_8: 40572932-40583447 Setaria italica
Seita.8G252300 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 40572932-40582931 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182900 5267 Panicoideae View MSA
124575112 5269 Grass View MSA
122042394 5273 Angiosperm View MSA
121309957 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.063       Low
cufflinks 2.706        
cufflinks 2.998        
cufflinks 5.007        
cufflinks 4.002        
cufflinks 2.706        
cufflinks 2.683        
cufflinks 3.676        
cufflinks 4.94        
cufflinks 15.175       High
cufflinks 2.165       Low
cufflinks 3.3        
cufflinks 3.753        
cufflinks 6.598       High
cufflinks 3.004        
cufflinks 2.514        
cufflinks 4.841        
cufflinks 1.913       Low
cufflinks 3.979        
cufflinks 3.024        

0 Strain