Gene : Seita.8G170300 S. italica v2.2
Defline:  (1 of 1) PTHR31846:SF13 - CRM FAMILY MEMBER 3A-RELATED Genomic Order:  1703
Name:  ? Seita.8G170300 Secondary Identifier:  ? PAC:32716022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G170300 0.5kb upstream 0.5kb upstream 6113 true scaffold_8: 31291976-31298088 Setaria italica
Seita.8G170300 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 31297589-31298088 Setaria italica
Seita.8G170300 0.5kb downstream 0.5kb downstream 6113 true scaffold_8: 31291476-31297588 Setaria italica
Seita.8G170300 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 31291476-31291975 Setaria italica
Seita.8G170300 1.0kb upstream 1.0kb upstream 6613 true scaffold_8: 31291976-31298588 Setaria italica
Seita.8G170300 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 31297589-31298588 Setaria italica
Seita.8G170300 1.0kb downstream 1.0kb downstream 6613 true scaffold_8: 31290976-31297588 Setaria italica
Seita.8G170300 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 31290976-31291975 Setaria italica
Seita.8G170300 2.0kb upstream 2.0kb upstream 7613 true scaffold_8: 31291976-31299588 Setaria italica
Seita.8G170300 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 31297589-31299588 Setaria italica
Seita.8G170300 2.0kb downstream 2.0kb downstream 7613 true scaffold_8: 31289976-31297588 Setaria italica
Seita.8G170300 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 31289976-31291975 Setaria italica
Seita.8G170300 5.0kb upstream 5.0kb upstream 10613 true scaffold_8: 31291976-31302588 Setaria italica
Seita.8G170300 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 31297589-31302588 Setaria italica
Seita.8G170300 5.0kb downstream 5.0kb downstream 10613 true scaffold_8: 31286976-31297588 Setaria italica
Seita.8G170300 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 31286976-31291975 Setaria italica
Seita.8G170300 10.0kb upstream 10.0kb upstream 15613 true scaffold_8: 31291976-31307588 Setaria italica
Seita.8G170300 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 31297589-31307588 Setaria italica
Seita.8G170300 10.0kb downstream 10.0kb downstream 15613 true scaffold_8: 31281976-31297588 Setaria italica
Seita.8G170300 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 31281976-31291975 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180085 5267 Panicoideae View MSA
124569286 5269 Grass View MSA
122043214 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.199        
cufflinks 7.851        
cufflinks 13.645     High High
cufflinks 9.236        
cufflinks 15.186     High High
cufflinks 8.554        
cufflinks 9.25        
cufflinks 11.329        
cufflinks 21.39     High High
cufflinks 3.212        
cufflinks 5.286        
cufflinks 1.139       Low
cufflinks 2.661        
cufflinks 14.96     High High
cufflinks 1.633       Low
cufflinks 8.706        
cufflinks 1.456       Low
cufflinks 6.375        
cufflinks 3.952        
cufflinks 1.736       Low

0 Strain