Gene : Seita.8G173200 S. italica v2.2
Defline:  (1 of 33) PF12776 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_3) Genomic Order:  1732
Name:  ? Seita.8G173200 Secondary Identifier:  ? PAC:32715863
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G173200 0.5kb upstream 0.5kb upstream 7286 true scaffold_8: 31618751-31626036 Setaria italica
Seita.8G173200 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 31618751-31619250 Setaria italica
Seita.8G173200 0.5kb downstream 0.5kb downstream 7286 true scaffold_8: 31619251-31626536 Setaria italica
Seita.8G173200 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 31626037-31626536 Setaria italica
Seita.8G173200 1.0kb upstream 1.0kb upstream 7786 true scaffold_8: 31618251-31626036 Setaria italica
Seita.8G173200 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 31618251-31619250 Setaria italica
Seita.8G173200 1.0kb downstream 1.0kb downstream 7786 true scaffold_8: 31619251-31627036 Setaria italica
Seita.8G173200 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 31626037-31627036 Setaria italica
Seita.8G173200 2.0kb upstream 2.0kb upstream 8786 true scaffold_8: 31617251-31626036 Setaria italica
Seita.8G173200 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 31617251-31619250 Setaria italica
Seita.8G173200 2.0kb downstream 2.0kb downstream 8786 true scaffold_8: 31619251-31628036 Setaria italica
Seita.8G173200 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 31626037-31628036 Setaria italica
Seita.8G173200 5.0kb upstream 5.0kb upstream 11786 true scaffold_8: 31614251-31626036 Setaria italica
Seita.8G173200 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 31614251-31619250 Setaria italica
Seita.8G173200 5.0kb downstream 5.0kb downstream 11786 true scaffold_8: 31619251-31631036 Setaria italica
Seita.8G173200 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 31626037-31631036 Setaria italica
Seita.8G173200 10.0kb upstream 10.0kb upstream 16786 true scaffold_8: 31609251-31626036 Setaria italica
Seita.8G173200 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 31609251-31619250 Setaria italica
Seita.8G173200 10.0kb downstream 10.0kb downstream 16786 true scaffold_8: 31619251-31636036 Setaria italica
Seita.8G173200 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 31626037-31636036 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122199841 5267 Panicoideae View MSA
124591138 5269 Grass View MSA
122051638 5273 Angiosperm View MSA
121312593 5274 Embryophyte View MSA
123349751 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.683        
cufflinks 5.777        
cufflinks 3.688        
cufflinks 4.293        
cufflinks 5.756        
cufflinks 5.044        
cufflinks 9.134        
cufflinks 6.805        
cufflinks 10.26        
cufflinks 0.004     Low Low
cufflinks 5.649        
cufflinks 1.416        
cufflinks 1.344        
cufflinks 1.752        
cufflinks 1.363        
cufflinks 16.592     High  
cufflinks 1.568        
cufflinks 12.022     High  
cufflinks 2.994        
cufflinks 1.415        

0 Strain