Gene : Seita.8G195600 S. italica v2.2
Defline:  (1 of 21) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  1956
Name:  ? Seita.8G195600 Secondary Identifier:  ? PAC:32716131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G195600 0.5kb upstream 0.5kb upstream 4137 true scaffold_8: 34262214-34266350 Setaria italica
Seita.8G195600 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 34265851-34266350 Setaria italica
Seita.8G195600 0.5kb downstream 0.5kb downstream 4137 true scaffold_8: 34261714-34265850 Setaria italica
Seita.8G195600 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 34261714-34262213 Setaria italica
Seita.8G195600 1.0kb upstream 1.0kb upstream 4637 true scaffold_8: 34262214-34266850 Setaria italica
Seita.8G195600 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 34265851-34266850 Setaria italica
Seita.8G195600 1.0kb downstream 1.0kb downstream 4637 true scaffold_8: 34261214-34265850 Setaria italica
Seita.8G195600 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 34261214-34262213 Setaria italica
Seita.8G195600 2.0kb upstream 2.0kb upstream 5637 true scaffold_8: 34262214-34267850 Setaria italica
Seita.8G195600 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 34265851-34267850 Setaria italica
Seita.8G195600 2.0kb downstream 2.0kb downstream 5637 true scaffold_8: 34260214-34265850 Setaria italica
Seita.8G195600 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 34260214-34262213 Setaria italica
Seita.8G195600 5.0kb upstream 5.0kb upstream 8637 true scaffold_8: 34262214-34270850 Setaria italica
Seita.8G195600 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 34265851-34270850 Setaria italica
Seita.8G195600 5.0kb downstream 5.0kb downstream 8637 true scaffold_8: 34257214-34265850 Setaria italica
Seita.8G195600 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 34257214-34262213 Setaria italica
Seita.8G195600 10.0kb upstream 10.0kb upstream 13637 true scaffold_8: 34262214-34275850 Setaria italica
Seita.8G195600 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 34265851-34275850 Setaria italica
Seita.8G195600 10.0kb downstream 10.0kb downstream 13637 true scaffold_8: 34252214-34265850 Setaria italica
Seita.8G195600 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 34252214-34262213 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122198214 5267 Panicoideae View MSA
124577900 5269 Grass View MSA
122043935 5273 Angiosperm View MSA
121310211 5274 Embryophyte View MSA
123347763 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.606        
cufflinks 1.32        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 1.535       High
cufflinks 0.428        
cufflinks 0.492        
cufflinks 0.209        
cufflinks 1.071        
cufflinks 0.567        
cufflinks 0.459        
cufflinks 0.256        
cufflinks 0.008     Low Low
cufflinks 0.655        
cufflinks 0.147        
cufflinks 0.718        
cufflinks 0.102        
cufflinks 0.011     Low Low
cufflinks 0.85        

0 Strain