Gene : Seita.8G206900 S. italica v2.2
Defline:  (1 of 4) PTHR30620:SF4 - BETA-D-XYLOSIDASE 2-RELATED Genomic Order:  2069
Name:  ? Seita.8G206900 Secondary Identifier:  ? PAC:32714870
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.8G206900 0.5kb upstream 0.5kb upstream 2514 true scaffold_8: 35521234-35523747 Setaria italica
Seita.8G206900 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 35521234-35521733 Setaria italica
Seita.8G206900 0.5kb downstream 0.5kb downstream 2514 true scaffold_8: 35521734-35524247 Setaria italica
Seita.8G206900 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 35523748-35524247 Setaria italica
Seita.8G206900 1.0kb upstream 1.0kb upstream 3014 true scaffold_8: 35520734-35523747 Setaria italica
Seita.8G206900 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 35520734-35521733 Setaria italica
Seita.8G206900 1.0kb downstream 1.0kb downstream 3014 true scaffold_8: 35521734-35524747 Setaria italica
Seita.8G206900 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 35523748-35524747 Setaria italica
Seita.8G206900 2.0kb upstream 2.0kb upstream 4014 true scaffold_8: 35519734-35523747 Setaria italica
Seita.8G206900 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 35519734-35521733 Setaria italica
Seita.8G206900 2.0kb downstream 2.0kb downstream 4014 true scaffold_8: 35521734-35525747 Setaria italica
Seita.8G206900 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 35523748-35525747 Setaria italica
Seita.8G206900 5.0kb upstream 5.0kb upstream 7014 true scaffold_8: 35516734-35523747 Setaria italica
Seita.8G206900 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 35516734-35521733 Setaria italica
Seita.8G206900 5.0kb downstream 5.0kb downstream 7014 true scaffold_8: 35521734-35528747 Setaria italica
Seita.8G206900 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 35523748-35528747 Setaria italica
Seita.8G206900 10.0kb upstream 10.0kb upstream 12014 true scaffold_8: 35511734-35523747 Setaria italica
Seita.8G206900 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 35511734-35521733 Setaria italica
Seita.8G206900 10.0kb downstream 10.0kb downstream 12014 true scaffold_8: 35521734-35533747 Setaria italica
Seita.8G206900 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 35523748-35533747 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122195513 5267 Panicoideae View MSA
124574962 5269 Grass View MSA
122047485 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low Low
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.251       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.086     Low  
cufflinks 0.049     Low  
cufflinks 0.27     Low High
cufflinks 0.079     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.015     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  

0 Strain