Gene : Seita.9G052400 S. italica v2.2
Defline:  (1 of 1) PTHR11702:SF3 - GTP-BINDING PROTEIN 10 Genomic Order:  524
Name:  ? Seita.9G052400 Secondary Identifier:  ? PAC:32690660
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G052400 0.5kb upstream 0.5kb upstream 5396 true scaffold_9: 3022953-3028348 Setaria italica
Seita.9G052400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3027849-3028348 Setaria italica
Seita.9G052400 0.5kb downstream 0.5kb downstream 5396 true scaffold_9: 3022453-3027848 Setaria italica
Seita.9G052400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3022453-3022952 Setaria italica
Seita.9G052400 1.0kb upstream 1.0kb upstream 5896 true scaffold_9: 3022953-3028848 Setaria italica
Seita.9G052400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3027849-3028848 Setaria italica
Seita.9G052400 1.0kb downstream 1.0kb downstream 5896 true scaffold_9: 3021953-3027848 Setaria italica
Seita.9G052400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3021953-3022952 Setaria italica
Seita.9G052400 2.0kb upstream 2.0kb upstream 6896 true scaffold_9: 3022953-3029848 Setaria italica
Seita.9G052400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3027849-3029848 Setaria italica
Seita.9G052400 2.0kb downstream 2.0kb downstream 6896 true scaffold_9: 3020953-3027848 Setaria italica
Seita.9G052400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3020953-3022952 Setaria italica
Seita.9G052400 5.0kb upstream 5.0kb upstream 9896 true scaffold_9: 3022953-3032848 Setaria italica
Seita.9G052400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3027849-3032848 Setaria italica
Seita.9G052400 5.0kb downstream 5.0kb downstream 9896 true scaffold_9: 3017953-3027848 Setaria italica
Seita.9G052400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3017953-3022952 Setaria italica
Seita.9G052400 10.0kb upstream 10.0kb upstream 14896 true scaffold_9: 3022953-3037848 Setaria italica
Seita.9G052400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3027849-3037848 Setaria italica
Seita.9G052400 10.0kb downstream 10.0kb downstream 14896 true scaffold_9: 3012953-3027848 Setaria italica
Seita.9G052400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3012953-3022952 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184426 5267 Panicoideae View MSA
124576840 5269 Grass View MSA
122048134 5273 Angiosperm View MSA
121348183 5274 Embryophyte View MSA
123428506 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.092        
cufflinks 2.913        
cufflinks 4.547        
cufflinks 2.625        
cufflinks 5.116        
cufflinks 2.811        
cufflinks 5.71        
cufflinks 8.171       High
cufflinks 11.482       High
cufflinks 0.819        
cufflinks 1.919        
cufflinks 0.63       Low
cufflinks 0.47       Low
cufflinks 7.642       High
cufflinks 0.505       Low
cufflinks 4.732        
cufflinks 0.532       Low
cufflinks 2.383        
cufflinks 2.075        
cufflinks 0.463       Low

0 Strain