Gene : Seita.9G059100 S. italica v2.2
Defline:  (1 of 2) PTHR11909:SF131 - CASEIN KINASE-LIKE PROTEIN-RELATED Genomic Order:  591
Name:  ? Seita.9G059100 Secondary Identifier:  ? PAC:32688846
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G059100 0.5kb upstream 0.5kb upstream 9294 true scaffold_9: 3407835-3417128 Setaria italica
Seita.9G059100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3416629-3417128 Setaria italica
Seita.9G059100 0.5kb downstream 0.5kb downstream 9294 true scaffold_9: 3407335-3416628 Setaria italica
Seita.9G059100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3407335-3407834 Setaria italica
Seita.9G059100 1.0kb upstream 1.0kb upstream 9794 true scaffold_9: 3407835-3417628 Setaria italica
Seita.9G059100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3416629-3417628 Setaria italica
Seita.9G059100 1.0kb downstream 1.0kb downstream 9794 true scaffold_9: 3406835-3416628 Setaria italica
Seita.9G059100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3406835-3407834 Setaria italica
Seita.9G059100 2.0kb upstream 2.0kb upstream 10794 true scaffold_9: 3407835-3418628 Setaria italica
Seita.9G059100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3416629-3418628 Setaria italica
Seita.9G059100 2.0kb downstream 2.0kb downstream 10794 true scaffold_9: 3405835-3416628 Setaria italica
Seita.9G059100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3405835-3407834 Setaria italica
Seita.9G059100 5.0kb upstream 5.0kb upstream 13794 true scaffold_9: 3407835-3421628 Setaria italica
Seita.9G059100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3416629-3421628 Setaria italica
Seita.9G059100 5.0kb downstream 5.0kb downstream 13794 true scaffold_9: 3402835-3416628 Setaria italica
Seita.9G059100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3402835-3407834 Setaria italica
Seita.9G059100 10.0kb upstream 10.0kb upstream 18794 true scaffold_9: 3407835-3426628 Setaria italica
Seita.9G059100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3416629-3426628 Setaria italica
Seita.9G059100 10.0kb downstream 10.0kb downstream 18794 true scaffold_9: 3397835-3416628 Setaria italica
Seita.9G059100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3397835-3407834 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
122181835 5267 Panicoideae View MSA
124568931 5269 Grass View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.125        
cufflinks 1.683        
cufflinks 3.517       High
cufflinks 2.541       High
cufflinks 1.501        
cufflinks 1.295        
cufflinks 2.314       High
cufflinks 2.05        
cufflinks 1.07        
cufflinks 0.943        
cufflinks 1.179        
cufflinks 1.043        
cufflinks 0.822       Low
cufflinks 3.715       High
cufflinks 0.99        
cufflinks 1.468        
cufflinks 0.903       Low
cufflinks 1.179        
cufflinks 2.198        
cufflinks 1.075        

0 Strain