Gene : Seita.9G058000 S. italica v2.2
Defline:  (1 of 123) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  580
Name:  ? Seita.9G058000 Secondary Identifier:  ? PAC:32688332
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G058000 0.5kb upstream 0.5kb upstream 2134 true scaffold_9: 3356392-3358525 Setaria italica
Seita.9G058000 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3358026-3358525 Setaria italica
Seita.9G058000 0.5kb downstream 0.5kb downstream 2134 true scaffold_9: 3355892-3358025 Setaria italica
Seita.9G058000 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3355892-3356391 Setaria italica
Seita.9G058000 1.0kb upstream 1.0kb upstream 2634 true scaffold_9: 3356392-3359025 Setaria italica
Seita.9G058000 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3358026-3359025 Setaria italica
Seita.9G058000 1.0kb downstream 1.0kb downstream 2634 true scaffold_9: 3355392-3358025 Setaria italica
Seita.9G058000 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3355392-3356391 Setaria italica
Seita.9G058000 2.0kb upstream 2.0kb upstream 3634 true scaffold_9: 3356392-3360025 Setaria italica
Seita.9G058000 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3358026-3360025 Setaria italica
Seita.9G058000 2.0kb downstream 2.0kb downstream 3634 true scaffold_9: 3354392-3358025 Setaria italica
Seita.9G058000 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3354392-3356391 Setaria italica
Seita.9G058000 5.0kb upstream 5.0kb upstream 6634 true scaffold_9: 3356392-3363025 Setaria italica
Seita.9G058000 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3358026-3363025 Setaria italica
Seita.9G058000 5.0kb downstream 5.0kb downstream 6634 true scaffold_9: 3351392-3358025 Setaria italica
Seita.9G058000 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3351392-3356391 Setaria italica
Seita.9G058000 10.0kb upstream 10.0kb upstream 11634 true scaffold_9: 3356392-3368025 Setaria italica
Seita.9G058000 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3358026-3368025 Setaria italica
Seita.9G058000 10.0kb downstream 10.0kb downstream 11634 true scaffold_9: 3346392-3358025 Setaria italica
Seita.9G058000 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3346392-3356391 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122193733 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.39        
cufflinks 0.28        
cufflinks 0.238        
cufflinks 0.212        
cufflinks 0.114        
cufflinks 0.167        
cufflinks 0.14        
cufflinks 0.059     Low Low
cufflinks 0.276        
cufflinks 0.051     Low Low
cufflinks 0.164        
cufflinks 0.883       High
cufflinks 1.914       High
cufflinks 0.457        
cufflinks 0.861       High
cufflinks 0.17        
cufflinks 0.612        
cufflinks 0.332        
cufflinks 0.355        
cufflinks 1.266       High

0 Strain