Gene : Seita.9G067400 S. italica v2.2
Defline:  (1 of 123) PF07762 - Protein of unknown function (DUF1618) (DUF1618) Genomic Order:  674
Name:  ? Seita.9G067400 Secondary Identifier:  ? PAC:32687312
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G067400 0.5kb upstream 0.5kb upstream 2460 true scaffold_9: 3914969-3917428 Setaria italica
Seita.9G067400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3916929-3917428 Setaria italica
Seita.9G067400 0.5kb downstream 0.5kb downstream 2460 true scaffold_9: 3914469-3916928 Setaria italica
Seita.9G067400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3914469-3914968 Setaria italica
Seita.9G067400 1.0kb upstream 1.0kb upstream 2960 true scaffold_9: 3914969-3917928 Setaria italica
Seita.9G067400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3916929-3917928 Setaria italica
Seita.9G067400 1.0kb downstream 1.0kb downstream 2960 true scaffold_9: 3913969-3916928 Setaria italica
Seita.9G067400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3913969-3914968 Setaria italica
Seita.9G067400 2.0kb upstream 2.0kb upstream 3960 true scaffold_9: 3914969-3918928 Setaria italica
Seita.9G067400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3916929-3918928 Setaria italica
Seita.9G067400 2.0kb downstream 2.0kb downstream 3960 true scaffold_9: 3912969-3916928 Setaria italica
Seita.9G067400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3912969-3914968 Setaria italica
Seita.9G067400 5.0kb upstream 5.0kb upstream 6960 true scaffold_9: 3914969-3921928 Setaria italica
Seita.9G067400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3916929-3921928 Setaria italica
Seita.9G067400 5.0kb downstream 5.0kb downstream 6960 true scaffold_9: 3909969-3916928 Setaria italica
Seita.9G067400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3909969-3914968 Setaria italica
Seita.9G067400 10.0kb upstream 10.0kb upstream 11960 true scaffold_9: 3914969-3926928 Setaria italica
Seita.9G067400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3916929-3926928 Setaria italica
Seita.9G067400 10.0kb downstream 10.0kb downstream 11960 true scaffold_9: 3904969-3916928 Setaria italica
Seita.9G067400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3904969-3914968 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994770 5273 Angiosperm View MSA
122193733 5267 Panicoideae View MSA
124585583 5269 Grass View MSA
121264986 5274 Embryophyte View MSA
123303402 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.323        
cufflinks 0.162       Low
cufflinks 0.445        
cufflinks 0.617        
cufflinks 0.562        
cufflinks 0.277        
cufflinks 0.658        
cufflinks 1.144       High
cufflinks 0.693        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.19       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.958       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.506        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.331        
cufflinks 0.738        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain