Gene : Seita.9G065700 S. italica v2.2
Defline:  (1 of 1) PTHR14467 - ARV1 Genomic Order:  657
Name:  ? Seita.9G065700 Secondary Identifier:  ? PAC:32691776
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G065700 0.5kb upstream 0.5kb upstream 4049 true scaffold_9: 3802188-3806236 Setaria italica
Seita.9G065700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3802188-3802687 Setaria italica
Seita.9G065700 0.5kb downstream 0.5kb downstream 4049 true scaffold_9: 3802688-3806736 Setaria italica
Seita.9G065700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3806237-3806736 Setaria italica
Seita.9G065700 1.0kb upstream 1.0kb upstream 4549 true scaffold_9: 3801688-3806236 Setaria italica
Seita.9G065700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3801688-3802687 Setaria italica
Seita.9G065700 1.0kb downstream 1.0kb downstream 4549 true scaffold_9: 3802688-3807236 Setaria italica
Seita.9G065700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3806237-3807236 Setaria italica
Seita.9G065700 2.0kb upstream 2.0kb upstream 5549 true scaffold_9: 3800688-3806236 Setaria italica
Seita.9G065700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3800688-3802687 Setaria italica
Seita.9G065700 2.0kb downstream 2.0kb downstream 5549 true scaffold_9: 3802688-3808236 Setaria italica
Seita.9G065700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3806237-3808236 Setaria italica
Seita.9G065700 5.0kb upstream 5.0kb upstream 8549 true scaffold_9: 3797688-3806236 Setaria italica
Seita.9G065700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3797688-3802687 Setaria italica
Seita.9G065700 5.0kb downstream 5.0kb downstream 8549 true scaffold_9: 3802688-3811236 Setaria italica
Seita.9G065700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3806237-3811236 Setaria italica
Seita.9G065700 10.0kb upstream 10.0kb upstream 13549 true scaffold_9: 3792688-3806236 Setaria italica
Seita.9G065700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3792688-3802687 Setaria italica
Seita.9G065700 10.0kb downstream 10.0kb downstream 13549 true scaffold_9: 3802688-3816236 Setaria italica
Seita.9G065700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3806237-3816236 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175598 5267 Panicoideae View MSA
124573651 5269 Grass View MSA
122045663 5273 Angiosperm View MSA
121347718 5274 Embryophyte View MSA
123380605 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.124       High
cufflinks 1.844       High
cufflinks 1.034        
cufflinks 0.866        
cufflinks 0.725       Low
cufflinks 1.631        
cufflinks 1.282        
cufflinks 1.244        
cufflinks 0.737       Low
cufflinks 1.474        
cufflinks 1.467        
cufflinks 0.957        
cufflinks 0.915        
cufflinks 0.755       Low
cufflinks 1.411        
cufflinks 1.705       High
cufflinks 1.558        
cufflinks 1.313        
cufflinks 0.729       Low
cufflinks 1.477        

0 Strain