Gene : Seita.9G071300 S. italica v2.2
Defline:  (1 of 2) 5.3.1.9 - Glucose-6-phosphate isomerase / Phosphosaccharomutase Genomic Order:  713
Name:  ? Seita.9G071300 Secondary Identifier:  ? PAC:32688952
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Sequence Feature Displayer

Ontology Annotation Displayer

9 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica ANAEROFRUCAT-PWY Setaria italica pathologic  
Sitalica ANAGLYCOLYSIS-PWY Setaria italica pathologic  
Sitalica GLUCONEO-PWY Setaria italica pathologic  
Sitalica PWY-3801 Setaria italica pathologic  
Sitalica PWY-5659 Setaria italica pathologic  
Sitalica PWY-621 Setaria italica pathologic  
Sitalica PWY-622 Setaria italica pathologic  
Sitalica PWY-7238 Setaria italica pathologic  
Sitalica SUCSYN-PWY Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G071300 0.5kb upstream 0.5kb upstream 7536 true scaffold_9: 4178601-4186136 Setaria italica
Seita.9G071300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4185637-4186136 Setaria italica
Seita.9G071300 0.5kb downstream 0.5kb downstream 7536 true scaffold_9: 4178101-4185636 Setaria italica
Seita.9G071300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4178101-4178600 Setaria italica
Seita.9G071300 1.0kb upstream 1.0kb upstream 8036 true scaffold_9: 4178601-4186636 Setaria italica
Seita.9G071300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4185637-4186636 Setaria italica
Seita.9G071300 1.0kb downstream 1.0kb downstream 8036 true scaffold_9: 4177601-4185636 Setaria italica
Seita.9G071300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4177601-4178600 Setaria italica
Seita.9G071300 2.0kb upstream 2.0kb upstream 9036 true scaffold_9: 4178601-4187636 Setaria italica
Seita.9G071300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4185637-4187636 Setaria italica
Seita.9G071300 2.0kb downstream 2.0kb downstream 9036 true scaffold_9: 4176601-4185636 Setaria italica
Seita.9G071300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4176601-4178600 Setaria italica
Seita.9G071300 5.0kb upstream 5.0kb upstream 12036 true scaffold_9: 4178601-4190636 Setaria italica
Seita.9G071300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4185637-4190636 Setaria italica
Seita.9G071300 5.0kb downstream 5.0kb downstream 12036 true scaffold_9: 4173601-4185636 Setaria italica
Seita.9G071300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4173601-4178600 Setaria italica
Seita.9G071300 10.0kb upstream 10.0kb upstream 17036 true scaffold_9: 4178601-4195636 Setaria italica
Seita.9G071300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4185637-4195636 Setaria italica
Seita.9G071300 10.0kb downstream 10.0kb downstream 17036 true scaffold_9: 4168601-4185636 Setaria italica
Seita.9G071300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4168601-4178600 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186634 5267 Panicoideae View MSA
124589808 5269 Grass View MSA
122048619 5273 Angiosperm View MSA
121347898 5274 Embryophyte View MSA
123424804 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.725     High  
cufflinks 11.488       Low
cufflinks 26.663     High  
cufflinks 28.52     High  
cufflinks 32.211     High  
cufflinks 9.707       Low
cufflinks 14.97     High Low
cufflinks 25.44     High  
cufflinks 21.794     High  
cufflinks 19.366     High  
cufflinks 25.285     High  
cufflinks 45.071     High High
cufflinks 30.343     High  
cufflinks 26.981     High  
cufflinks 27.86     High  
cufflinks 16.829     High  
cufflinks 39.804     High High
cufflinks 16.216     High  
cufflinks 22.235     High  
cufflinks 33.56     High  

0 Strain