Gene : Seita.9G089400 S. italica v2.2
Defline:  (1 of 3) PTHR11003//PTHR11003:SF137 - POTASSIUM CHANNEL, SUBFAMILY K Genomic Order:  894
Name:  ? Seita.9G089400 Secondary Identifier:  ? PAC:32689384
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G089400 0.5kb upstream 0.5kb upstream 5499 true scaffold_9: 5394870-5400368 Setaria italica
Seita.9G089400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5394870-5395369 Setaria italica
Seita.9G089400 0.5kb downstream 0.5kb downstream 5499 true scaffold_9: 5395370-5400868 Setaria italica
Seita.9G089400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5400369-5400868 Setaria italica
Seita.9G089400 1.0kb upstream 1.0kb upstream 5999 true scaffold_9: 5394370-5400368 Setaria italica
Seita.9G089400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5394370-5395369 Setaria italica
Seita.9G089400 1.0kb downstream 1.0kb downstream 5999 true scaffold_9: 5395370-5401368 Setaria italica
Seita.9G089400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5400369-5401368 Setaria italica
Seita.9G089400 2.0kb upstream 2.0kb upstream 6999 true scaffold_9: 5393370-5400368 Setaria italica
Seita.9G089400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5393370-5395369 Setaria italica
Seita.9G089400 2.0kb downstream 2.0kb downstream 6999 true scaffold_9: 5395370-5402368 Setaria italica
Seita.9G089400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5400369-5402368 Setaria italica
Seita.9G089400 5.0kb upstream 5.0kb upstream 9999 true scaffold_9: 5390370-5400368 Setaria italica
Seita.9G089400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5390370-5395369 Setaria italica
Seita.9G089400 5.0kb downstream 5.0kb downstream 9999 true scaffold_9: 5395370-5405368 Setaria italica
Seita.9G089400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5400369-5405368 Setaria italica
Seita.9G089400 10.0kb upstream 10.0kb upstream 14999 true scaffold_9: 5385370-5400368 Setaria italica
Seita.9G089400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5385370-5395369 Setaria italica
Seita.9G089400 10.0kb downstream 10.0kb downstream 14999 true scaffold_9: 5395370-5410368 Setaria italica
Seita.9G089400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5400369-5410368 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177553 5267 Panicoideae View MSA
124577069 5269 Grass View MSA
122044893 5273 Angiosperm View MSA
121351714 5274 Embryophyte View MSA
123382287 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.536        
cufflinks 2.257       Low
cufflinks 3.552        
cufflinks 3.419        
cufflinks 3.064        
cufflinks 2.252       Low
cufflinks 3.617        
cufflinks 2.449        
cufflinks 2.978        
cufflinks 1.824       Low
cufflinks 2.947        
cufflinks 3.961        
cufflinks 6.286       High
cufflinks 2.569        
cufflinks 3.503        
cufflinks 5.04       High
cufflinks 4.659       High
cufflinks 5.197       High
cufflinks 2.649        
cufflinks 3.601        

0 Strain