Gene : Seita.9G090600 S. italica v2.2
Defline:  (1 of 1) PTHR12374:SF23 - TRANSCRIPTIONAL ADAPTER ADA2A Genomic Order:  906
Name:  ? Seita.9G090600 Secondary Identifier:  ? PAC:32689817
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G090600 0.5kb upstream 0.5kb upstream 6808 true scaffold_9: 5469810-5476617 Setaria italica
Seita.9G090600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5469810-5470309 Setaria italica
Seita.9G090600 0.5kb downstream 0.5kb downstream 6808 true scaffold_9: 5470310-5477117 Setaria italica
Seita.9G090600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5476618-5477117 Setaria italica
Seita.9G090600 1.0kb upstream 1.0kb upstream 7308 true scaffold_9: 5469310-5476617 Setaria italica
Seita.9G090600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5469310-5470309 Setaria italica
Seita.9G090600 1.0kb downstream 1.0kb downstream 7308 true scaffold_9: 5470310-5477617 Setaria italica
Seita.9G090600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5476618-5477617 Setaria italica
Seita.9G090600 2.0kb upstream 2.0kb upstream 8308 true scaffold_9: 5468310-5476617 Setaria italica
Seita.9G090600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5468310-5470309 Setaria italica
Seita.9G090600 2.0kb downstream 2.0kb downstream 8308 true scaffold_9: 5470310-5478617 Setaria italica
Seita.9G090600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5476618-5478617 Setaria italica
Seita.9G090600 5.0kb upstream 5.0kb upstream 11308 true scaffold_9: 5465310-5476617 Setaria italica
Seita.9G090600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5465310-5470309 Setaria italica
Seita.9G090600 5.0kb downstream 5.0kb downstream 11308 true scaffold_9: 5470310-5481617 Setaria italica
Seita.9G090600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5476618-5481617 Setaria italica
Seita.9G090600 10.0kb upstream 10.0kb upstream 16308 true scaffold_9: 5460310-5476617 Setaria italica
Seita.9G090600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5460310-5470309 Setaria italica
Seita.9G090600 10.0kb downstream 10.0kb downstream 16308 true scaffold_9: 5470310-5486617 Setaria italica
Seita.9G090600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5476618-5486617 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187364 5267 Panicoideae View MSA
124576777 5269 Grass View MSA
122047628 5273 Angiosperm View MSA
121346644 5274 Embryophyte View MSA
123425030 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.44     High  
cufflinks 20.705     High High
cufflinks 11.48     High  
cufflinks 10.65        
cufflinks 9.009       Low
cufflinks 18.783     High High
cufflinks 15.318     High  
cufflinks 11.699        
cufflinks 11.281        
cufflinks 8.134       Low
cufflinks 12.116        
cufflinks 17.595     High High
cufflinks 12.804        
cufflinks 11.473        
cufflinks 17.09     High  
cufflinks 15.19     High  
cufflinks 16.03     High  
cufflinks 17.411     High High
cufflinks 9.54       Low
cufflinks 15.29     High  

0 Strain