Gene : Seita.9G006800 S. italica v2.2
Defline:  (1 of 1) PTHR21596//PTHR21596:SF8 - RIBONUCLEASE P SUBUNIT P38 Genomic Order:  68
Name:  ? Seita.9G006800 Secondary Identifier:  ? PAC:32693282
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G006800 0.5kb upstream 0.5kb upstream 8966 true scaffold_9: 379159-388124 Setaria italica
Seita.9G006800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 379159-379658 Setaria italica
Seita.9G006800 0.5kb downstream 0.5kb downstream 8966 true scaffold_9: 379659-388624 Setaria italica
Seita.9G006800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 388125-388624 Setaria italica
Seita.9G006800 1.0kb upstream 1.0kb upstream 9466 true scaffold_9: 378659-388124 Setaria italica
Seita.9G006800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 378659-379658 Setaria italica
Seita.9G006800 1.0kb downstream 1.0kb downstream 9466 true scaffold_9: 379659-389124 Setaria italica
Seita.9G006800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 388125-389124 Setaria italica
Seita.9G006800 2.0kb upstream 2.0kb upstream 10466 true scaffold_9: 377659-388124 Setaria italica
Seita.9G006800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 377659-379658 Setaria italica
Seita.9G006800 2.0kb downstream 2.0kb downstream 10466 true scaffold_9: 379659-390124 Setaria italica
Seita.9G006800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 388125-390124 Setaria italica
Seita.9G006800 5.0kb upstream 5.0kb upstream 13466 true scaffold_9: 374659-388124 Setaria italica
Seita.9G006800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 374659-379658 Setaria italica
Seita.9G006800 5.0kb downstream 5.0kb downstream 13466 true scaffold_9: 379659-393124 Setaria italica
Seita.9G006800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 388125-393124 Setaria italica
Seita.9G006800 10.0kb upstream 10.0kb upstream 18466 true scaffold_9: 369659-388124 Setaria italica
Seita.9G006800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 369659-379658 Setaria italica
Seita.9G006800 10.0kb downstream 10.0kb downstream 18466 true scaffold_9: 379659-398124 Setaria italica
Seita.9G006800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 388125-398124 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122049496 5273 Angiosperm View MSA
122196377 5267 Panicoideae View MSA
124588134 5269 Grass View MSA
121311438 5274 Embryophyte View MSA
123348734 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.952        
cufflinks 2.106        
cufflinks 0.029     Low Low
cufflinks 0.003     Low Low
cufflinks 0.022     Low Low
cufflinks 2.09        
cufflinks 0.791        
cufflinks 0.991        
cufflinks 0.587        
cufflinks 1.314        
cufflinks 1.504        
cufflinks 0.762        
cufflinks 0.418        
cufflinks 0.033     Low Low
cufflinks 1.135        
cufflinks 0.429        
cufflinks 1.154        
cufflinks 0.248        
cufflinks 0.01     Low Low
cufflinks 1.083        

0 Strain