Gene : Seita.9G004800 S. italica v2.2
Defline:  (1 of 1) PTHR20863//PTHR20863:SF34 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED Genomic Order:  48
Name:  ? Seita.9G004800 Secondary Identifier:  ? PAC:32690896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G004800 0.5kb upstream 0.5kb upstream 2913 true scaffold_9: 289181-292093 Setaria italica
Seita.9G004800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 289181-289680 Setaria italica
Seita.9G004800 0.5kb downstream 0.5kb downstream 2913 true scaffold_9: 289681-292593 Setaria italica
Seita.9G004800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 292094-292593 Setaria italica
Seita.9G004800 1.0kb upstream 1.0kb upstream 3413 true scaffold_9: 288681-292093 Setaria italica
Seita.9G004800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 288681-289680 Setaria italica
Seita.9G004800 1.0kb downstream 1.0kb downstream 3413 true scaffold_9: 289681-293093 Setaria italica
Seita.9G004800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 292094-293093 Setaria italica
Seita.9G004800 2.0kb upstream 2.0kb upstream 4413 true scaffold_9: 287681-292093 Setaria italica
Seita.9G004800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 287681-289680 Setaria italica
Seita.9G004800 2.0kb downstream 2.0kb downstream 4413 true scaffold_9: 289681-294093 Setaria italica
Seita.9G004800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 292094-294093 Setaria italica
Seita.9G004800 5.0kb upstream 5.0kb upstream 7413 true scaffold_9: 284681-292093 Setaria italica
Seita.9G004800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 284681-289680 Setaria italica
Seita.9G004800 5.0kb downstream 5.0kb downstream 7413 true scaffold_9: 289681-297093 Setaria italica
Seita.9G004800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 292094-297093 Setaria italica
Seita.9G004800 10.0kb upstream 10.0kb upstream 12413 true scaffold_9: 279681-292093 Setaria italica
Seita.9G004800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 279681-289680 Setaria italica
Seita.9G004800 10.0kb downstream 10.0kb downstream 12413 true scaffold_9: 289681-302093 Setaria italica
Seita.9G004800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 292094-302093 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185847 5267 Panicoideae View MSA
124585320 5269 Grass View MSA
122049325 5273 Angiosperm View MSA
121348515 5274 Embryophyte View MSA
123428029 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.44        
cufflinks 15.587     High High
cufflinks 3.683       Low
cufflinks 3.858        
cufflinks 3.804       Low
cufflinks 13.61     High  
cufflinks 8.221        
cufflinks 13.332        
cufflinks 8.623        
cufflinks 15.151       High
cufflinks 10.565        
cufflinks 9.659        
cufflinks 9.399        
cufflinks 6.044        
cufflinks 12.518        
cufflinks 2.305       Low
cufflinks 12.475        
cufflinks 1.858       Low
cufflinks 3.777       Low
cufflinks 15.872     High High

0 Strain