Gene : Seita.9G007400 S. italica v2.2
Genomic Order:  74 Name:  ? Seita.9G007400
Secondary Identifier:  ? PAC:32689333
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G007400 0.5kb upstream 0.5kb upstream 2523 true scaffold_9: 406276-408798 Setaria italica
Seita.9G007400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 406276-406775 Setaria italica
Seita.9G007400 0.5kb downstream 0.5kb downstream 2523 true scaffold_9: 406776-409298 Setaria italica
Seita.9G007400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 408799-409298 Setaria italica
Seita.9G007400 1.0kb upstream 1.0kb upstream 3023 true scaffold_9: 405776-408798 Setaria italica
Seita.9G007400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 405776-406775 Setaria italica
Seita.9G007400 1.0kb downstream 1.0kb downstream 3023 true scaffold_9: 406776-409798 Setaria italica
Seita.9G007400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 408799-409798 Setaria italica
Seita.9G007400 2.0kb upstream 2.0kb upstream 4023 true scaffold_9: 404776-408798 Setaria italica
Seita.9G007400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 404776-406775 Setaria italica
Seita.9G007400 2.0kb downstream 2.0kb downstream 4023 true scaffold_9: 406776-410798 Setaria italica
Seita.9G007400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 408799-410798 Setaria italica
Seita.9G007400 5.0kb upstream 5.0kb upstream 7023 true scaffold_9: 401776-408798 Setaria italica
Seita.9G007400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 401776-406775 Setaria italica
Seita.9G007400 5.0kb downstream 5.0kb downstream 7023 true scaffold_9: 406776-413798 Setaria italica
Seita.9G007400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 408799-413798 Setaria italica
Seita.9G007400 10.0kb upstream 10.0kb upstream 12023 true scaffold_9: 396776-408798 Setaria italica
Seita.9G007400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 396776-406775 Setaria italica
Seita.9G007400 10.0kb downstream 10.0kb downstream 12023 true scaffold_9: 406776-418798 Setaria italica
Seita.9G007400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 408799-418798 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179796 5267 Panicoideae View MSA
124568268 5269 Grass View MSA
122045923 5273 Angiosperm View MSA
121346832 5274 Embryophyte View MSA
123380452 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.889        
cufflinks 6.528        
cufflinks 2.915        
cufflinks 1.924       Low
cufflinks 2.183       Low
cufflinks 6.811        
cufflinks 3.733        
cufflinks 8.989       High
cufflinks 4.819        
cufflinks 7.517       High
cufflinks 4.316        
cufflinks 4.301        
cufflinks 3.857        
cufflinks 5.004        
cufflinks 5.842        
cufflinks 2.252       Low
cufflinks 7.525       High
cufflinks 1.941       Low
cufflinks 3.01        
cufflinks 7.537       High

0 Strain