Gene : Seita.9G011900 S. italica v2.2
Defline:  (1 of 1) PTHR12961 - CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 Genomic Order:  119
Name:  ? Seita.9G011900 Secondary Identifier:  ? PAC:32693234
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G011900 0.5kb upstream 0.5kb upstream 6636 true scaffold_9: 638945-645580 Setaria italica
Seita.9G011900 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 638945-639444 Setaria italica
Seita.9G011900 0.5kb downstream 0.5kb downstream 6636 true scaffold_9: 639445-646080 Setaria italica
Seita.9G011900 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 645581-646080 Setaria italica
Seita.9G011900 1.0kb upstream 1.0kb upstream 7136 true scaffold_9: 638445-645580 Setaria italica
Seita.9G011900 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 638445-639444 Setaria italica
Seita.9G011900 1.0kb downstream 1.0kb downstream 7136 true scaffold_9: 639445-646580 Setaria italica
Seita.9G011900 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 645581-646580 Setaria italica
Seita.9G011900 2.0kb upstream 2.0kb upstream 8136 true scaffold_9: 637445-645580 Setaria italica
Seita.9G011900 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 637445-639444 Setaria italica
Seita.9G011900 2.0kb downstream 2.0kb downstream 8136 true scaffold_9: 639445-647580 Setaria italica
Seita.9G011900 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 645581-647580 Setaria italica
Seita.9G011900 5.0kb upstream 5.0kb upstream 11136 true scaffold_9: 634445-645580 Setaria italica
Seita.9G011900 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 634445-639444 Setaria italica
Seita.9G011900 5.0kb downstream 5.0kb downstream 11136 true scaffold_9: 639445-650580 Setaria italica
Seita.9G011900 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 645581-650580 Setaria italica
Seita.9G011900 10.0kb upstream 10.0kb upstream 16136 true scaffold_9: 629445-645580 Setaria italica
Seita.9G011900 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 629445-639444 Setaria italica
Seita.9G011900 10.0kb downstream 10.0kb downstream 16136 true scaffold_9: 639445-655580 Setaria italica
Seita.9G011900 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 645581-655580 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184018 5267 Panicoideae View MSA
124569829 5269 Grass View MSA
122042143 5273 Angiosperm View MSA
121348897 5274 Embryophyte View MSA
123428033 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.75        
cufflinks 8.556       High
cufflinks 4.177        
cufflinks 2.558       Low
cufflinks 2.392       Low
cufflinks 8.226       High
cufflinks 5.43        
cufflinks 5.642        
cufflinks 3.885        
cufflinks 4.13        
cufflinks 6.466        
cufflinks 6.251        
cufflinks 4.141        
cufflinks 5.726        
cufflinks 8.241       High
cufflinks 3.613        
cufflinks 6.96        
cufflinks 2.919       Low
cufflinks 4.112        
cufflinks 8.405       High

0 Strain