Gene : Seita.9G015800 S. italica v2.2
Defline:  (1 of 1) PTHR13395 - SISTER CHROMATID COHESION PROTEIN DCC1-RELATED Genomic Order:  158
Name:  ? Seita.9G015800 Secondary Identifier:  ? PAC:32691195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G015800 0.5kb upstream 0.5kb upstream 3182 true scaffold_9: 820772-823953 Setaria italica
Seita.9G015800 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 820772-821271 Setaria italica
Seita.9G015800 0.5kb downstream 0.5kb downstream 3182 true scaffold_9: 821272-824453 Setaria italica
Seita.9G015800 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 823954-824453 Setaria italica
Seita.9G015800 1.0kb upstream 1.0kb upstream 3682 true scaffold_9: 820272-823953 Setaria italica
Seita.9G015800 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 820272-821271 Setaria italica
Seita.9G015800 1.0kb downstream 1.0kb downstream 3682 true scaffold_9: 821272-824953 Setaria italica
Seita.9G015800 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 823954-824953 Setaria italica
Seita.9G015800 2.0kb upstream 2.0kb upstream 4682 true scaffold_9: 819272-823953 Setaria italica
Seita.9G015800 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 819272-821271 Setaria italica
Seita.9G015800 2.0kb downstream 2.0kb downstream 4682 true scaffold_9: 821272-825953 Setaria italica
Seita.9G015800 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 823954-825953 Setaria italica
Seita.9G015800 5.0kb upstream 5.0kb upstream 7682 true scaffold_9: 816272-823953 Setaria italica
Seita.9G015800 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 816272-821271 Setaria italica
Seita.9G015800 5.0kb downstream 5.0kb downstream 7682 true scaffold_9: 821272-828953 Setaria italica
Seita.9G015800 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 823954-828953 Setaria italica
Seita.9G015800 10.0kb upstream 10.0kb upstream 12682 true scaffold_9: 811272-823953 Setaria italica
Seita.9G015800 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 811272-821271 Setaria italica
Seita.9G015800 10.0kb downstream 10.0kb downstream 12682 true scaffold_9: 821272-833953 Setaria italica
Seita.9G015800 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 823954-833953 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191680 5267 Panicoideae View MSA
124575033 5269 Grass View MSA
122045586 5273 Angiosperm View MSA
121346207 5274 Embryophyte View MSA
123425480 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.222        
cufflinks 5.23        
cufflinks 0.042     Low Low
cufflinks 0.038     Low Low
cufflinks 0.021     Low Low
cufflinks 5.33        
cufflinks 3.117        
cufflinks 4.58        
cufflinks 2.44        
cufflinks 1.87        
cufflinks 5.236        
cufflinks 2.426        
cufflinks 3.07        
cufflinks 0.115     Low Low
cufflinks 4.523        
cufflinks 0.452        
cufflinks 4.223        
cufflinks 0.117       Low
cufflinks 0.163        
cufflinks 4.626        

0 Strain