Gene : Seita.9G026300 S. italica v2.2
Defline:  (1 of 1) PTHR23244:SF262 - KELCH DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  263
Name:  ? Seita.9G026300 Secondary Identifier:  ? PAC:32689157
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G026300 0.5kb upstream 0.5kb upstream 8477 true scaffold_9: 1404120-1412596 Setaria italica
Seita.9G026300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1404120-1404619 Setaria italica
Seita.9G026300 0.5kb downstream 0.5kb downstream 8477 true scaffold_9: 1404620-1413096 Setaria italica
Seita.9G026300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1412597-1413096 Setaria italica
Seita.9G026300 1.0kb upstream 1.0kb upstream 8977 true scaffold_9: 1403620-1412596 Setaria italica
Seita.9G026300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1403620-1404619 Setaria italica
Seita.9G026300 1.0kb downstream 1.0kb downstream 8977 true scaffold_9: 1404620-1413596 Setaria italica
Seita.9G026300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1412597-1413596 Setaria italica
Seita.9G026300 2.0kb upstream 2.0kb upstream 9977 true scaffold_9: 1402620-1412596 Setaria italica
Seita.9G026300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1402620-1404619 Setaria italica
Seita.9G026300 2.0kb downstream 2.0kb downstream 9977 true scaffold_9: 1404620-1414596 Setaria italica
Seita.9G026300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1412597-1414596 Setaria italica
Seita.9G026300 5.0kb upstream 5.0kb upstream 12977 true scaffold_9: 1399620-1412596 Setaria italica
Seita.9G026300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1399620-1404619 Setaria italica
Seita.9G026300 5.0kb downstream 5.0kb downstream 12977 true scaffold_9: 1404620-1417596 Setaria italica
Seita.9G026300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1412597-1417596 Setaria italica
Seita.9G026300 10.0kb upstream 10.0kb upstream 17977 true scaffold_9: 1394620-1412596 Setaria italica
Seita.9G026300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1394620-1404619 Setaria italica
Seita.9G026300 10.0kb downstream 10.0kb downstream 17977 true scaffold_9: 1404620-1422596 Setaria italica
Seita.9G026300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1412597-1422596 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041060 5273 Angiosperm View MSA
122183567 5267 Panicoideae View MSA
124571574 5269 Grass View MSA
121344753 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.426       High
cufflinks 4.912        
cufflinks 3.149       Low
cufflinks 3.019       Low
cufflinks 2.495       Low
cufflinks 4.718        
cufflinks 4.021        
cufflinks 4.035        
cufflinks 2.781       Low
cufflinks 6.037        
cufflinks 5.251        
cufflinks 5.775        
cufflinks 5.578        
cufflinks 3.314        
cufflinks 6.022        
cufflinks 4.955        
cufflinks 6.298       High
cufflinks 6.075        
cufflinks 2.949       Low
cufflinks 5.616        

0 Strain