Gene : Seita.9G031400 S. italica v2.2
Defline:  (1 of 1) PTHR19316:SF17 - HSP70-INTERACTING PROTEIN FES1B-LIKE PROTEIN-RELATED Genomic Order:  314
Name:  ? Seita.9G031400 Secondary Identifier:  ? PAC:32687637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G031400 0.5kb upstream 0.5kb upstream 3611 true scaffold_9: 1700137-1703747 Setaria italica
Seita.9G031400 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1703248-1703747 Setaria italica
Seita.9G031400 0.5kb downstream 0.5kb downstream 3611 true scaffold_9: 1699637-1703247 Setaria italica
Seita.9G031400 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1699637-1700136 Setaria italica
Seita.9G031400 1.0kb upstream 1.0kb upstream 4111 true scaffold_9: 1700137-1704247 Setaria italica
Seita.9G031400 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1703248-1704247 Setaria italica
Seita.9G031400 1.0kb downstream 1.0kb downstream 4111 true scaffold_9: 1699137-1703247 Setaria italica
Seita.9G031400 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1699137-1700136 Setaria italica
Seita.9G031400 2.0kb upstream 2.0kb upstream 5111 true scaffold_9: 1700137-1705247 Setaria italica
Seita.9G031400 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1703248-1705247 Setaria italica
Seita.9G031400 2.0kb downstream 2.0kb downstream 5111 true scaffold_9: 1698137-1703247 Setaria italica
Seita.9G031400 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1698137-1700136 Setaria italica
Seita.9G031400 5.0kb upstream 5.0kb upstream 8111 true scaffold_9: 1700137-1708247 Setaria italica
Seita.9G031400 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1703248-1708247 Setaria italica
Seita.9G031400 5.0kb downstream 5.0kb downstream 8111 true scaffold_9: 1695137-1703247 Setaria italica
Seita.9G031400 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1695137-1700136 Setaria italica
Seita.9G031400 10.0kb upstream 10.0kb upstream 13111 true scaffold_9: 1700137-1713247 Setaria italica
Seita.9G031400 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1703248-1713247 Setaria italica
Seita.9G031400 10.0kb downstream 10.0kb downstream 13111 true scaffold_9: 1690137-1703247 Setaria italica
Seita.9G031400 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1690137-1700136 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182100 5267 Panicoideae View MSA
124577891 5269 Grass View MSA
122045261 5273 Angiosperm View MSA
121346137 5274 Embryophyte View MSA
123424210 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.358     High High
cufflinks 17.867     High High
cufflinks 10.99     High Low
cufflinks 10.859       Low
cufflinks 11.566     High Low
cufflinks 17.342     High High
cufflinks 14.065     High  
cufflinks 10.289       Low
cufflinks 12.147        
cufflinks 17.075     High High
cufflinks 16.273     High  
cufflinks 13.977     High  
cufflinks 13.827     High  
cufflinks 11.172       Low
cufflinks 14.705     High  
cufflinks 13.11     High  
cufflinks 14.134     High  
cufflinks 19.698     High High
cufflinks 14.138     High  
cufflinks 13.743        

0 Strain