Gene : Seita.9G034300 S. italica v2.2
Defline:  (1 of 16) PTHR10953 - UBIQUITIN-ACTIVATING ENZYME E1 Genomic Order:  343
Name:  ? Seita.9G034300 Secondary Identifier:  ? PAC:32686796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G034300 0.5kb upstream 0.5kb upstream 8032 true scaffold_9: 1883500-1891531 Setaria italica
Seita.9G034300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1891032-1891531 Setaria italica
Seita.9G034300 0.5kb downstream 0.5kb downstream 8032 true scaffold_9: 1883000-1891031 Setaria italica
Seita.9G034300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1883000-1883499 Setaria italica
Seita.9G034300 1.0kb upstream 1.0kb upstream 8532 true scaffold_9: 1883500-1892031 Setaria italica
Seita.9G034300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1891032-1892031 Setaria italica
Seita.9G034300 1.0kb downstream 1.0kb downstream 8532 true scaffold_9: 1882500-1891031 Setaria italica
Seita.9G034300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1882500-1883499 Setaria italica
Seita.9G034300 2.0kb upstream 2.0kb upstream 9532 true scaffold_9: 1883500-1893031 Setaria italica
Seita.9G034300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1891032-1893031 Setaria italica
Seita.9G034300 2.0kb downstream 2.0kb downstream 9532 true scaffold_9: 1881500-1891031 Setaria italica
Seita.9G034300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1881500-1883499 Setaria italica
Seita.9G034300 5.0kb upstream 5.0kb upstream 12532 true scaffold_9: 1883500-1896031 Setaria italica
Seita.9G034300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1891032-1896031 Setaria italica
Seita.9G034300 5.0kb downstream 5.0kb downstream 12532 true scaffold_9: 1878500-1891031 Setaria italica
Seita.9G034300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1878500-1883499 Setaria italica
Seita.9G034300 10.0kb upstream 10.0kb upstream 17532 true scaffold_9: 1883500-1901031 Setaria italica
Seita.9G034300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1891032-1901031 Setaria italica
Seita.9G034300 10.0kb downstream 10.0kb downstream 17532 true scaffold_9: 1873500-1891031 Setaria italica
Seita.9G034300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1873500-1883499 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041299 5273 Angiosperm View MSA
122195070 5267 Panicoideae View MSA
124577740 5269 Grass View MSA
121347842 5274 Embryophyte View MSA
123426326 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.857        
cufflinks 3.309       High
cufflinks 1.689        
cufflinks 1.46       Low
cufflinks 1.452       Low
cufflinks 3.246       High
cufflinks 1.928        
cufflinks 2.074        
cufflinks 1.9        
cufflinks 1.888        
cufflinks 2.433        
cufflinks 3.094       High
cufflinks 2.707        
cufflinks 2.036        
cufflinks 3.078        
cufflinks 1.963        
cufflinks 3.177       High
cufflinks 2.913        
cufflinks 1.231       Low
cufflinks 2.987        

0 Strain