Gene : Seita.9G032600 S. italica v2.2
Defline:  (1 of 1) PTHR10859:SF91 - DOLICHYL-PHOSPHATE BETA-GLUCOSYLTRANSFERASE Genomic Order:  326
Name:  ? Seita.9G032600 Secondary Identifier:  ? PAC:32691588
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G032600 0.5kb upstream 0.5kb upstream 2968 true scaffold_9: 1781774-1784741 Setaria italica
Seita.9G032600 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1781774-1782273 Setaria italica
Seita.9G032600 0.5kb downstream 0.5kb downstream 2968 true scaffold_9: 1782274-1785241 Setaria italica
Seita.9G032600 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1784742-1785241 Setaria italica
Seita.9G032600 1.0kb upstream 1.0kb upstream 3468 true scaffold_9: 1781274-1784741 Setaria italica
Seita.9G032600 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1781274-1782273 Setaria italica
Seita.9G032600 1.0kb downstream 1.0kb downstream 3468 true scaffold_9: 1782274-1785741 Setaria italica
Seita.9G032600 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1784742-1785741 Setaria italica
Seita.9G032600 2.0kb upstream 2.0kb upstream 4468 true scaffold_9: 1780274-1784741 Setaria italica
Seita.9G032600 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1780274-1782273 Setaria italica
Seita.9G032600 2.0kb downstream 2.0kb downstream 4468 true scaffold_9: 1782274-1786741 Setaria italica
Seita.9G032600 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1784742-1786741 Setaria italica
Seita.9G032600 5.0kb upstream 5.0kb upstream 7468 true scaffold_9: 1777274-1784741 Setaria italica
Seita.9G032600 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1777274-1782273 Setaria italica
Seita.9G032600 5.0kb downstream 5.0kb downstream 7468 true scaffold_9: 1782274-1789741 Setaria italica
Seita.9G032600 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1784742-1789741 Setaria italica
Seita.9G032600 10.0kb upstream 10.0kb upstream 12468 true scaffold_9: 1772274-1784741 Setaria italica
Seita.9G032600 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1772274-1782273 Setaria italica
Seita.9G032600 10.0kb downstream 10.0kb downstream 12468 true scaffold_9: 1782274-1794741 Setaria italica
Seita.9G032600 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1784742-1794741 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194854 5267 Panicoideae View MSA
124575089 5269 Grass View MSA
122045523 5273 Angiosperm View MSA
121344582 5274 Embryophyte View MSA
123425002 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.931        
cufflinks 18.715     High High
cufflinks 9.639       Low
cufflinks 9.562       Low
cufflinks 8.815       Low
cufflinks 20.436     High High
cufflinks 10.431        
cufflinks 14.902     High  
cufflinks 11.614        
cufflinks 13.482        
cufflinks 12.827        
cufflinks 16.775     High  
cufflinks 15.11     High  
cufflinks 12.392        
cufflinks 17.532     High High
cufflinks 8.473       Low
cufflinks 19.975     High High
cufflinks 9.379       Low
cufflinks 9.507       Low
cufflinks 19.157     High High

0 Strain