Gene : Seita.9G037300 S. italica v2.2
Defline:  (1 of 1) PTHR11615//PTHR11615:SF160 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  373
Name:  ? Seita.9G037300 Secondary Identifier:  ? PAC:32693419
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G037300 0.5kb upstream 0.5kb upstream 3940 true scaffold_9: 2064540-2068479 Setaria italica
Seita.9G037300 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2064540-2065039 Setaria italica
Seita.9G037300 0.5kb downstream 0.5kb downstream 3940 true scaffold_9: 2065040-2068979 Setaria italica
Seita.9G037300 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2068480-2068979 Setaria italica
Seita.9G037300 1.0kb upstream 1.0kb upstream 4440 true scaffold_9: 2064040-2068479 Setaria italica
Seita.9G037300 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2064040-2065039 Setaria italica
Seita.9G037300 1.0kb downstream 1.0kb downstream 4440 true scaffold_9: 2065040-2069479 Setaria italica
Seita.9G037300 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2068480-2069479 Setaria italica
Seita.9G037300 2.0kb upstream 2.0kb upstream 5440 true scaffold_9: 2063040-2068479 Setaria italica
Seita.9G037300 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2063040-2065039 Setaria italica
Seita.9G037300 2.0kb downstream 2.0kb downstream 5440 true scaffold_9: 2065040-2070479 Setaria italica
Seita.9G037300 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2068480-2070479 Setaria italica
Seita.9G037300 5.0kb upstream 5.0kb upstream 8440 true scaffold_9: 2060040-2068479 Setaria italica
Seita.9G037300 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2060040-2065039 Setaria italica
Seita.9G037300 5.0kb downstream 5.0kb downstream 8440 true scaffold_9: 2065040-2073479 Setaria italica
Seita.9G037300 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2068480-2073479 Setaria italica
Seita.9G037300 10.0kb upstream 10.0kb upstream 13440 true scaffold_9: 2055040-2068479 Setaria italica
Seita.9G037300 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2055040-2065039 Setaria italica
Seita.9G037300 10.0kb downstream 10.0kb downstream 13440 true scaffold_9: 2065040-2078479 Setaria italica
Seita.9G037300 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2068480-2078479 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184586 5267 Panicoideae View MSA
124568581 5269 Grass View MSA
122047644 5273 Angiosperm View MSA
121351377 5274 Embryophyte View MSA
123382143 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.222        
cufflinks 0.43       Low
cufflinks 1.773        
cufflinks 2.744        
cufflinks 3.704       High
cufflinks 0.534       Low
cufflinks 1.921        
cufflinks 1.471        
cufflinks 2.812        
cufflinks 3.615       High
cufflinks 1.444        
cufflinks 1.655        
cufflinks 2.251        
cufflinks 4.046       High
cufflinks 1.83        
cufflinks 0.82       Low
cufflinks 2.145        
cufflinks 1.297        
cufflinks 2.85        
cufflinks 2.034        

0 Strain