Gene : Seita.9G037100 S. italica v2.2
Defline:  (1 of 1) PTHR32285:SF11 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 34 Genomic Order:  371
Name:  ? Seita.9G037100 Secondary Identifier:  ? PAC:32693432
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G037100 0.5kb upstream 0.5kb upstream 3187 true scaffold_9: 2045271-2048457 Setaria italica
Seita.9G037100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2045271-2045770 Setaria italica
Seita.9G037100 0.5kb downstream 0.5kb downstream 3187 true scaffold_9: 2045771-2048957 Setaria italica
Seita.9G037100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2048458-2048957 Setaria italica
Seita.9G037100 1.0kb upstream 1.0kb upstream 3687 true scaffold_9: 2044771-2048457 Setaria italica
Seita.9G037100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2044771-2045770 Setaria italica
Seita.9G037100 1.0kb downstream 1.0kb downstream 3687 true scaffold_9: 2045771-2049457 Setaria italica
Seita.9G037100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2048458-2049457 Setaria italica
Seita.9G037100 2.0kb upstream 2.0kb upstream 4687 true scaffold_9: 2043771-2048457 Setaria italica
Seita.9G037100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2043771-2045770 Setaria italica
Seita.9G037100 2.0kb downstream 2.0kb downstream 4687 true scaffold_9: 2045771-2050457 Setaria italica
Seita.9G037100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2048458-2050457 Setaria italica
Seita.9G037100 5.0kb upstream 5.0kb upstream 7687 true scaffold_9: 2040771-2048457 Setaria italica
Seita.9G037100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2040771-2045770 Setaria italica
Seita.9G037100 5.0kb downstream 5.0kb downstream 7687 true scaffold_9: 2045771-2053457 Setaria italica
Seita.9G037100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2048458-2053457 Setaria italica
Seita.9G037100 10.0kb upstream 10.0kb upstream 12687 true scaffold_9: 2035771-2048457 Setaria italica
Seita.9G037100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2035771-2045770 Setaria italica
Seita.9G037100 10.0kb downstream 10.0kb downstream 12687 true scaffold_9: 2045771-2058457 Setaria italica
Seita.9G037100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2048458-2058457 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180684 5267 Panicoideae View MSA
124582912 5269 Grass View MSA
122045837 5273 Angiosperm View MSA
121310513 5274 Embryophyte View MSA
123347976 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.117     Low  
cufflinks 0.299        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.476        
cufflinks 0.205        
cufflinks 0.108     Low  
cufflinks 0.086     Low  
cufflinks 1.334       High
cufflinks 0.51        
cufflinks 0.365        
cufflinks 0.806        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.732       High
cufflinks 0.044     Low  
cufflinks 0.515        
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.173       High

0 Strain