Gene : Seita.9G036700 S. italica v2.2
Defline:  (1 of 1) 3.1.3.62 - Multiple inositol-polyphosphate phosphatase / MIPP Genomic Order:  367
Name:  ? Seita.9G036700 Secondary Identifier:  ? PAC:32690004
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-4781 Setaria italica pathologic  
Sitalica PWY-6358 Setaria italica pathologic  
Sitalica PWY-6364 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G036700 0.5kb upstream 0.5kb upstream 6933 true scaffold_9: 2012314-2019246 Setaria italica
Seita.9G036700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2018747-2019246 Setaria italica
Seita.9G036700 0.5kb downstream 0.5kb downstream 6933 true scaffold_9: 2011814-2018746 Setaria italica
Seita.9G036700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2011814-2012313 Setaria italica
Seita.9G036700 1.0kb upstream 1.0kb upstream 7433 true scaffold_9: 2012314-2019746 Setaria italica
Seita.9G036700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2018747-2019746 Setaria italica
Seita.9G036700 1.0kb downstream 1.0kb downstream 7433 true scaffold_9: 2011314-2018746 Setaria italica
Seita.9G036700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2011314-2012313 Setaria italica
Seita.9G036700 2.0kb upstream 2.0kb upstream 8433 true scaffold_9: 2012314-2020746 Setaria italica
Seita.9G036700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2018747-2020746 Setaria italica
Seita.9G036700 2.0kb downstream 2.0kb downstream 8433 true scaffold_9: 2010314-2018746 Setaria italica
Seita.9G036700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2010314-2012313 Setaria italica
Seita.9G036700 5.0kb upstream 5.0kb upstream 11433 true scaffold_9: 2012314-2023746 Setaria italica
Seita.9G036700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2018747-2023746 Setaria italica
Seita.9G036700 5.0kb downstream 5.0kb downstream 11433 true scaffold_9: 2007314-2018746 Setaria italica
Seita.9G036700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2007314-2012313 Setaria italica
Seita.9G036700 10.0kb upstream 10.0kb upstream 16433 true scaffold_9: 2012314-2028746 Setaria italica
Seita.9G036700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2018747-2028746 Setaria italica
Seita.9G036700 10.0kb downstream 10.0kb downstream 16433 true scaffold_9: 2002314-2018746 Setaria italica
Seita.9G036700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2002314-2012313 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188093 5267 Panicoideae View MSA
124572260 5269 Grass View MSA
122046100 5273 Angiosperm View MSA
121344587 5274 Embryophyte View MSA
123425669 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.623       High
cufflinks 7.089        
cufflinks 3.437       Low
cufflinks 3.811       Low
cufflinks 3.94        
cufflinks 7.406       High
cufflinks 3.301       Low
cufflinks 4.816        
cufflinks 3.938        
cufflinks 5.157        
cufflinks 5.628        
cufflinks 6.676        
cufflinks 7.235        
cufflinks 3.438       Low
cufflinks 6.118        
cufflinks 4.595        
cufflinks 7.186        
cufflinks 9.694       High
cufflinks 3.961        
cufflinks 5.824        

0 Strain