Gene : Seita.9G041100 S. italica v2.2
Defline:  (1 of 13) PF04759 - Protein of unknown function, DUF617 (DUF617) Genomic Order:  411
Name:  ? Seita.9G041100 Secondary Identifier:  ? PAC:32693783
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G041100 0.5kb upstream 0.5kb upstream 1454 true scaffold_9: 2292546-2293999 Setaria italica
Seita.9G041100 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2292546-2293045 Setaria italica
Seita.9G041100 0.5kb downstream 0.5kb downstream 1454 true scaffold_9: 2293046-2294499 Setaria italica
Seita.9G041100 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2294000-2294499 Setaria italica
Seita.9G041100 1.0kb upstream 1.0kb upstream 1954 true scaffold_9: 2292046-2293999 Setaria italica
Seita.9G041100 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2292046-2293045 Setaria italica
Seita.9G041100 1.0kb downstream 1.0kb downstream 1954 true scaffold_9: 2293046-2294999 Setaria italica
Seita.9G041100 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2294000-2294999 Setaria italica
Seita.9G041100 2.0kb upstream 2.0kb upstream 2954 true scaffold_9: 2291046-2293999 Setaria italica
Seita.9G041100 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2291046-2293045 Setaria italica
Seita.9G041100 2.0kb downstream 2.0kb downstream 2954 true scaffold_9: 2293046-2295999 Setaria italica
Seita.9G041100 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2294000-2295999 Setaria italica
Seita.9G041100 5.0kb upstream 5.0kb upstream 5954 true scaffold_9: 2288046-2293999 Setaria italica
Seita.9G041100 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2288046-2293045 Setaria italica
Seita.9G041100 5.0kb downstream 5.0kb downstream 5954 true scaffold_9: 2293046-2298999 Setaria italica
Seita.9G041100 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2294000-2298999 Setaria italica
Seita.9G041100 10.0kb upstream 10.0kb upstream 10954 true scaffold_9: 2283046-2293999 Setaria italica
Seita.9G041100 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2283046-2293045 Setaria italica
Seita.9G041100 10.0kb downstream 10.0kb downstream 10954 true scaffold_9: 2293046-2303999 Setaria italica
Seita.9G041100 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2294000-2303999 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122189375 5267 Panicoideae View MSA
124572881 5269 Grass View MSA
122044454 5273 Angiosperm View MSA
121349765 5274 Embryophyte View MSA
123381434 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low Low
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.404       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.084     Low  
cufflinks 0.352        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.196        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.267        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.128     Low  

0 Strain