Gene : Seita.9G043700 S. italica v2.2
Defline:  (1 of 21) PF03763 - Remorin, C-terminal region (Remorin_C) Genomic Order:  437
Name:  ? Seita.9G043700 Secondary Identifier:  ? PAC:32688388
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.9G043700 0.5kb upstream 0.5kb upstream 2706 true scaffold_9: 2464018-2466723 Setaria italica
Seita.9G043700 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2464018-2464517 Setaria italica
Seita.9G043700 0.5kb downstream 0.5kb downstream 2706 true scaffold_9: 2464518-2467223 Setaria italica
Seita.9G043700 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2466724-2467223 Setaria italica
Seita.9G043700 1.0kb upstream 1.0kb upstream 3206 true scaffold_9: 2463518-2466723 Setaria italica
Seita.9G043700 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2463518-2464517 Setaria italica
Seita.9G043700 1.0kb downstream 1.0kb downstream 3206 true scaffold_9: 2464518-2467723 Setaria italica
Seita.9G043700 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2466724-2467723 Setaria italica
Seita.9G043700 2.0kb upstream 2.0kb upstream 4206 true scaffold_9: 2462518-2466723 Setaria italica
Seita.9G043700 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2462518-2464517 Setaria italica
Seita.9G043700 2.0kb downstream 2.0kb downstream 4206 true scaffold_9: 2464518-2468723 Setaria italica
Seita.9G043700 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2466724-2468723 Setaria italica
Seita.9G043700 5.0kb upstream 5.0kb upstream 7206 true scaffold_9: 2459518-2466723 Setaria italica
Seita.9G043700 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2459518-2464517 Setaria italica
Seita.9G043700 5.0kb downstream 5.0kb downstream 7206 true scaffold_9: 2464518-2471723 Setaria italica
Seita.9G043700 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2466724-2471723 Setaria italica
Seita.9G043700 10.0kb upstream 10.0kb upstream 12206 true scaffold_9: 2454518-2466723 Setaria italica
Seita.9G043700 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2454518-2464517 Setaria italica
Seita.9G043700 10.0kb downstream 10.0kb downstream 12206 true scaffold_9: 2464518-2476723 Setaria italica
Seita.9G043700 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2466724-2476723 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122193153 5267 Panicoideae View MSA
124568626 5269 Grass View MSA
122046569 5273 Angiosperm View MSA
121351512 5274 Embryophyte View MSA
123382200 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.235     High  
cufflinks 13.094       Low
cufflinks 29.211     High  
cufflinks 39.591     High  
cufflinks 32.49     High  
cufflinks 12.713       Low
cufflinks 32.886     High  
cufflinks 26.241     High  
cufflinks 15.971     High Low
cufflinks 60.882     High High
cufflinks 26.095     High  
cufflinks 22.074     High  
cufflinks 42.109     High High
cufflinks 48.894     High High
cufflinks 22.717     High  
cufflinks 34.587     High  
cufflinks 17.974     High  
cufflinks 20.431     High  
cufflinks 49.477     High High
cufflinks 18.692     High  

0 Strain